RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TRIQKQ629K1 86 aa9.6□□□□□ -0.87
H3F3B-213ENST00000593254 PHLDA1Q8WV24 401 aaPredicted RBP9.6□□□□□ -0.87
H3F3B-213ENST00000593254 CIB3Q96Q77 187 aaPredicted RBP9.6□□□□□ -0.87
H3F3B-213ENST00000593254 IGKV1OR2-108A0A075B7D4 117 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 NAP1L6A6NFF2 107 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 PRSS46E5RG02 174 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 SYNGR2O43760 224 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 NDUFB6O95139 128 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 HOXB5P09067 269 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 C4BPBP20851 252 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
H3F3B-213ENST00000593254 RAB11AP62491 216 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 GGNBP1Q5YKI7 109 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 MZT2BQ6NZ67 158 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 Q8NAQ8 132 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 RAB40CQ96S21 281 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 TRGV9Q99603 122 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 PBDC1Q9BVG4 233 aa9.59□□□□□ -0.87
H3F3B-213ENST00000593254 C9orf170A2RU37 121 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 DEFB4AO15263 64 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 FABP1P07148 127 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 INPP1P49441 399 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 NANOS2P60321 138 aaKnown RBP9.58□□□□□ -0.88
H3F3B-213ENST00000593254 NRARPQ7Z6K4 114 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 THAP8Q8NA92 274 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 C11orf45Q8TAV5 145 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 C7orf50Q9BRJ6 194 aaKnown RBP9.58□□□□□ -0.88
H3F3B-213ENST00000593254 MFFQ9GZY8 342 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 MAGT1Q9H0U3 335 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 PFDN2Q9UHV9 154 aa9.58□□□□□ -0.88
H3F3B-213ENST00000593254 PAIP2BQ9ULR5 123 aaKnown RBP9.58□□□□□ -0.88
H3F3B-213ENST00000593254 ZNF705EA8MWA4 302 aaPredicted RBP9.57□□□□□ -0.88
H3F3B-213ENST00000593254 SNRPGP15A8MWD9 76 aa9.57□□□□□ -0.88
H3F3B-213ENST00000593254 WRBO00258 174 aa9.57□□□□□ -0.88
H3F3B-213ENST00000593254 BTCP35070 178 aa9.57□□□□□ -0.88
H3F3B-213ENST00000593254 LYZP61626 148 aa9.57□□□□□ -0.88
H3F3B-213ENST00000593254 RPP30P78346 268 aaKnown RBP9.57□□□□□ -0.88
H3F3B-213ENST00000593254 C1orf194Q5T5A4 169 aa9.57□□□□□ -0.88
H3F3B-213ENST00000593254 CSNK1G2-AS1Q8NCQ2 148 aa9.57□□□□□ -0.88
H3F3B-213ENST00000593254 FLVCR2Q9UPI3 526 aa9.57□□□□□ -0.88
H3F3B-213ENST00000593254 H3BMM0 161 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 PLA2G10O15496 165 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 ADAP1O75689 374 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 MIFP14174 115 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 NKX2-1P43699 371 aaPredicted RBP9.56□□□□□ -0.88
H3F3B-213ENST00000593254 ID3Q02535 119 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 OR2F1Q13607 317 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 HRH4Q9H3N8 390 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 CLEC5AQ9NY25 188 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 FBXL17Q9UF56 701 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 X6R8D5 127 aa9.56□□□□□ -0.88
H3F3B-213ENST00000593254 IGHV4-28A0A0C4DH34 117 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 H3BP45 60 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 SOCS3O14543 225 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 LYRM1O43325 122 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 CFDP00746 253 aaPredicted RBP9.55□□□□□ -0.88
H3F3B-213ENST00000593254 OR4E1P0C645 316 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 RBMY1A1P0DJD3 496 aaKnown RBP9.55□□□□□ -0.88
H3F3B-213ENST00000593254 RBMY1CP0DJD4 496 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 MED14OSP0DP75 135 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 HLA-DRB4P13762 266 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 RBMY1FQ15415 496 aaKnown RBP9.55□□□□□ -0.88
H3F3B-213ENST00000593254 SPANXN5Q5MJ07 72 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 AKAP14Q86UN6 197 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 COQ8AQ8NI60 647 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 ENKURQ8TC29 256 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 STRAPQ9Y3F4 350 aaKnown RBP9.55□□□□□ -0.88
H3F3B-213ENST00000593254 HLA-DRB4X5D2U9 266 aa9.55□□□□□ -0.88
H3F3B-213ENST00000593254 HSPG2P98160 4391 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 LINC00854A0A1B0GVQ3 168 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 CENPXA8MT69 81 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 PSMB3P49720 205 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 NUTF2P61970 127 aaKnown RBP9.54□□□□□ -0.88
H3F3B-213ENST00000593254 POLR2GP62487 172 aaKnown RBP eCLIP9.54□□□□□ -0.88
H3F3B-213ENST00000593254 ACOT7LQ6ZUV0 252 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 OR4D5Q8NGN0 318 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 MARVELD1Q9BSK0 173 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 C1QTNF4Q9BXJ3 329 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 SLC45A2Q9UMX9 530 aa9.54□□□□□ -0.88
H3F3B-213ENST00000593254 ELOA3CA0A087WX78 387 aaPredicted RBP9.53□□□□□ -0.88
H3F3B-213ENST00000593254 A0A1B0GVY2 172 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 BOLA2-SMG1P6H3BVE0 249 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 IFNA21P01568 189 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 ANXA7P20073 488 aaKnown RBP9.53□□□□□ -0.88
H3F3B-213ENST00000593254 ID1P41134 155 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 AKR1C1Q04828 323 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 C4orf46Q504U0 113 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 GDF5OSQ5U4N7 250 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 TMEM144Q7Z5S9 345 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 OR8I2Q8N0Y5 310 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 SAV1Q9H4B6 383 aaPredicted RBP9.53□□□□□ -0.88
H3F3B-213ENST00000593254 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
H3F3B-213ENST00000593254 FAM240BA0A1B0GVZ2 78 aa9.52□□□□□ -0.89
H3F3B-213ENST00000593254 C11orf94C9JXX5 98 aa9.52□□□□□ -0.89
H3F3B-213ENST00000593254 ISLRO14498 428 aa9.52□□□□□ -0.89
H3F3B-213ENST00000593254 GATA2P23769 480 aaPredicted RBP9.52□□□□□ -0.89
H3F3B-213ENST00000593254 DEFB1P60022 68 aa9.52□□□□□ -0.89
H3F3B-213ENST00000593254 TMEM182Q6ZP80 229 aaPredicted RBP9.52□□□□□ -0.89
H3F3B-213ENST00000593254 FOXI2Q6ZQN5 318 aa9.52□□□□□ -0.89
H3F3B-213ENST00000593254 BPIFCQ8NFQ6 507 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms