RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 IMUPQ9GZP8 106 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 LPAR5Q9H1C0 372 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 CST9LQ9H4G1 147 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 EFCAB1Q9HAE3 211 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 CXorf21Q9HAI6 301 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 CACYBPQ9HB71 228 aaKnown RBP3.31□□□□□ -1.88
SMAD4-216ENST00000593223 KCNIP2Q9NS61 270 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 AIG1Q9NVV5 245 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 TVP23BQ9NYZ1 205 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 BAIAP2Q9UQB8 552 aa3.31□□□□□ -1.88
SMAD4-216ENST00000593223 TMEM131Q92545 1883 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 BAZ2BQ9UIF8 2168 aaKnown RBP3.3□□□□□ -1.88
SMAD4-216ENST00000593223 OVOL1O14753 267 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 GSTZ1O43708 216 aaPredicted RBP3.3□□□□□ -1.88
SMAD4-216ENST00000593223 ADRA2AP08913 450 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 UCHL1P09936 223 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SMIM17P0DL12 118 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 GABRA3P34903 492 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 TAS2R20P59543 309 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 HERVK_113P61574 105 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 DHRS2Q13268 280 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 CST6Q15828 149 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 LRRC10Q5BKY1 277 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 Q6Q795 121 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SHISA6Q6ZSJ9 500 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 LINC00173Q6ZV60 143 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 TMEM252Q8N6L7 170 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 OR2T27Q8NH04 317 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SCGB1C1Q8TD33 95 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 FXYD5Q96DB9 178 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SLAMF6Q96DU3 332 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
SMAD4-216ENST00000593223 KCNS1Q96KK3 526 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 YPEL4Q96NS1 127 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 OR2A5Q96R48 311 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 PRADC1Q9BSG0 188 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SLC25A2Q9BXI2 301 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 POLR2J2Q9GZM3 115 aaKnown RBP3.3□□□□□ -1.88
SMAD4-216ENST00000593223 POLR2J3Q9H1A7 115 aaKnown RBP3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SLC25A22Q9H936 323 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 ANAPC10Q9UM13 185 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 MYH10P35580 1976 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SVEP1Q4LDE5 3571 aa3.3□□□□□ -1.88
SMAD4-216ENST00000593223 SHANK1Q9Y566 2161 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 MGAM2Q2M2H8 2515 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 IGKV1-8A0A0C4DH67 115 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 LOC102725191A0A1B0GVB3 256 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 PEX7O00628 323 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 COX7A2P2O60397 106 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 IGHV3-48P01763 117 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 LPAR6P43657 344 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 HERVK_113P63121 156 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 GLYATL3Q5SZD4 288 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 RASL11AQ6T310 242 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 ZNF695Q8IW36 515 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 RNF175Q8N4F7 328 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 OR5A2Q8NGI9 324 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 KLK6Q92876 244 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 SMIM14Q96QK8 99 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 TMEM243Q9BU79 118 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 GTSF1LQ9H1H1 148 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 TAAR3PQ9P1P4 343 aa3.29□□□□□ -1.88
SMAD4-216ENST00000593223 NUFIP1Q9UHK0 495 aaKnown RBP3.29□□□□□ -1.88
SMAD4-216ENST00000593223 TRAV30A0A087WSZ9 112 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 IFITM5A6NNB3 132 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 J3QRK9 145 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 M0R1X1 148 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 LGALS9O00182 355 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 RBFOX2O43251 390 aaKnown RBP eCLIP3.28□□□□□ -1.88
SMAD4-216ENST00000593223 DEDDO75618 318 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 DPM2O94777 84 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 CXorf1O96002 111 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 APODP05090 189 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 FABP3P05413 133 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 GPX1P07203 203 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 HIST1H1BP16401 226 aaKnown RBP3.28□□□□□ -1.88
SMAD4-216ENST00000593223 COPZ1P61923 177 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 RPL23P62829 140 aaKnown RBP3.28□□□□□ -1.88
SMAD4-216ENST00000593223 GNB2P62879 340 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 PSG7Q13046 419 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 RBMY1FQ15415 496 aaKnown RBP3.28□□□□□ -1.88
SMAD4-216ENST00000593223 FAM19A3Q7Z5A8 133 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 LINC00596Q86U02 117 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 MDP1Q86V88 176 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 SLC25A40Q8TBP6 338 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 RTN4IP1Q8WWV3 396 aaPredicted RBP3.28□□□□□ -1.88
SMAD4-216ENST00000593223 HIST1H2BAQ96A08 127 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 C2orf50Q96LR7 162 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 IGF2BP2-AS1Q96M15 143 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 HSD17B10Q99714 261 aaKnown RBP3.28□□□□□ -1.88
SMAD4-216ENST00000593223 OR2J1Q9GZK6 312 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 LINC00597Q9H2U6 94 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 CCL28Q9NRJ3 127 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 OR5AC2Q9NZP5 309 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 AK3Q9UIJ7 227 aa3.28□□□□□ -1.88
SMAD4-216ENST00000593223 RPUSD1Q9UJJ7 312 aaKnown RBP3.28□□□□□ -1.88
SMAD4-216ENST00000593223 TNFSF18Q9UNG2 199 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms