RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 WDR86Q86TI4 376 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 BOD1L2Q8IYS8 172 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 LINC00528Q8N1L1 170 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 TTC9CQ8N5M4 171 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 LINC00311Q8N616 119 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 TMEM75Q8N9X5 138 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 DCTN5Q9BTE1 182 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 NDUFA4L2Q9NRX3 87 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SPRR3Q9UBC9 169 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 SPCS1Q9Y6A9 102 aa2.89□□□□□ -1.95
VMP1-216ENST00000592790 ACACBO00763 2458 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 IGKV1D-17A0A075B6S4 117 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 K7EN84 100 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 NPPCP23582 126 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 S100A4P26447 101 aaKnown RBP2.88□□□□□ -1.95
VMP1-216ENST00000592790 PAPPA-AS1Q5QFB9 102 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 ZNF833PQ6ZTB9 187 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 NUP37Q8NFH4 326 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 ASCL2Q99929 193 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 FGF23Q9GZV9 251 aaPredicted RBP2.88□□□□□ -1.95
VMP1-216ENST00000592790 GGTLC3B5MD39 225 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 IGLV1-44P01699 117 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 PYYP10082 97 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 COX8AP10176 69 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 GPR6P46095 362 aaPredicted RBP2.88□□□□□ -1.95
VMP1-216ENST00000592790 MPV17L2Q567V2 206 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 OCIAD2Q56VL3 154 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 TMEM78Q5T7P6 136 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 UNQ6494/PRO21346Q6UXR6 183 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 ZNF788Q6ZQV5 615 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 C5orf24Q7Z6I8 188 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 SPACA3Q8IXA5 215 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 LEAP2Q969E1 77 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 ZNF479Q96JC4 524 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 CST9LQ9H4G1 147 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 RALYQ9UKM9 306 aaKnown RBP2.88□□□□□ -1.95
VMP1-216ENST00000592790 PSG8Q9UQ74 426 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 SLC25A15Q9Y619 301 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 R4GN57 208 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 EML5Q05BV3 1969 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 TRAV3A0A0B4J244 114 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 TRBV6-1A0A0K0K1D8 114 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 C17orf100A8MU93 164 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 H0YJW9 148 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 ANOS1P23352 680 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 GCSHP23434 173 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 CD40P25942 277 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 UQCRFS1P47985 274 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 CACNG7P62955 275 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 C5orf64Q2M2E5 130 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 LGALS9BQ3B8N2 356 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 AMMECR1LQ6DCA0 310 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 LGALS9CQ6DKI2 356 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 HCP5Q6MZN7 132 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 Q86TA4 180 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 DEFB125Q8N687 156 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 STPG4Q8N801 248 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 FER1L6-AS1Q8NA97 138 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 ARPC1AQ92747 370 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 CYYR1Q96J86 154 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 SLC50A1Q9BRV3 221 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 SSBP4Q9BWG4 385 aaPredicted RBP2.88□□□□□ -1.95
VMP1-216ENST00000592790 ZNF71Q9NQZ8 489 aaPredicted RBP2.88□□□□□ -1.95
VMP1-216ENST00000592790 ONECUT1Q9UBC0 465 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 CABIN1Q9Y6J0 2220 aa2.88□□□□□ -1.95
VMP1-216ENST00000592790 LOC389332A0A1B0GUA5 103 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 GAGE12BA1L429 117 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 OR11H12B2RN74 326 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 SHISA9B4DS77 424 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 MOSP00540 346 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 PLAUP00749 431 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 THBDP07204 575 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 GATA2P23769 480 aaPredicted RBP2.87□□□□□ -1.95
VMP1-216ENST00000592790 EIF4EBP1Q13541 118 aaPredicted RBP2.87□□□□□ -1.95
VMP1-216ENST00000592790 PRSS8Q16651 343 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 SAMD13Q5VXD3 122 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 C9orf106Q8NAJ2 232 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 OR11H1Q8NG94 326 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 OR11H2Q8NH07 326 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 IGF2BP2-AS1Q96M15 143 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 TMEM133Q9H2Q1 129 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 SPANXA1Q9NS26 97 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 ASCC3Q8N3C0 2202 aaKnown RBP2.87□□□□□ -1.95
VMP1-216ENST00000592790 A0A0G2JLM5 398 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 A0A1B0GUS0 222 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 MBD3L4A6NDZ8 208 aaPredicted RBP2.87□□□□□ -1.95
VMP1-216ENST00000592790 MBD3L3A6NE82 208 aaPredicted RBP2.87□□□□□ -1.95
VMP1-216ENST00000592790 C9orf118A6NHY6 69 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 MBD3L5A6NJ08 208 aaPredicted RBP2.87□□□□□ -1.95
VMP1-216ENST00000592790 FABP5P3A8MUU1 101 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 DPM2O94777 84 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 IGLL1P15814 213 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 FCGR2BP31994 310 aaPredicted RBP2.87□□□□□ -1.95
VMP1-216ENST00000592790 LOXL3P58215 753 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 CCL8P80075 99 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 SLAQ13239 276 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 GFRALQ6UXV0 394 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 SCGB1D4Q6XE38 83 aa2.87□□□□□ -1.95
VMP1-216ENST00000592790 Q6ZPA2 131 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms