RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 OR51G1Q8NGK1 321 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 KIR2DL5BQ8NHK3 375 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 DCANP1Q8TF63 244 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 RNF125Q96EQ8 232 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 TRGV9Q99603 122 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 RCL1Q9Y2P8 373 aaKnown RBP8.26□□□□□ -1.09
SMAD4-211ENST00000590499 PMS2P5A8MQ11 134 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 DNASE2O00115 360 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-211ENST00000590499 BUB3O43684 328 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 SSSCA1O60232 199 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 UPK1BO75841 260 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 APOC4P55056 127 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 IFITM3Q01628 133 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 CASC10Q5T4H9 136 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 OR8G2PQ6IF36 304 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 Q6ZWC4 215 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 STPG3Q8N7X2 389 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 ZNF431Q8TF32 576 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-211ENST00000590499 GRAMD2BQ96HH9 432 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 NARS2Q96I59 477 aaKnown RBP8.25□□□□□ -1.09
SMAD4-211ENST00000590499 SMIM8Q96KF7 97 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 SEC22CQ9BRL7 303 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 WDR12Q9GZL7 423 aaKnown RBP8.25□□□□□ -1.09
SMAD4-211ENST00000590499 RABAC1Q9UI14 185 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 PAIP2BQ9ULR5 123 aaKnown RBP8.25□□□□□ -1.09
SMAD4-211ENST00000590499 STRAPQ9Y3F4 350 aaKnown RBP8.25□□□□□ -1.09
SMAD4-211ENST00000590499 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
SMAD4-211ENST00000590499 FAM240BA0A1B0GVZ2 78 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 UBE2CO00762 179 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 CCSO14618 274 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 RPL35AP18077 110 aaKnown RBP8.24□□□□□ -1.09
SMAD4-211ENST00000590499 EIF2B2P49770 351 aaKnown RBP8.24□□□□□ -1.09
SMAD4-211ENST00000590499 RPL11P62913 178 aaKnown RBP8.24□□□□□ -1.09
SMAD4-211ENST00000590499 ZNF846Q147U1 533 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 MZT2BQ6NZ67 158 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 TMEM14EPQ6UXP3 125 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 ACOT7LQ6ZUV0 252 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 STXBP6Q8NFX7 210 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 PSENENQ9NZ42 101 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 TP53TG1Q9Y2A0 90 aa8.24□□□□□ -1.09
SMAD4-211ENST00000590499 HELTA6NFD8 242 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 TSC22D2O75157 780 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 CCNKO75909 580 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 MBPP02686 304 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-211ENST00000590499 FABP1P07148 127 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 LYL1P12980 280 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 ATF4P18848 351 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-211ENST00000590499 TAS2R30P59541 319 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 DEFB131AP59861 70 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 OR2F1Q13607 317 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 DEFB135Q30KP9 77 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 LEMD1Q68G75 181 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 BATF3Q9NR55 127 aa8.23□□□□□ -1.09
SMAD4-211ENST00000590499 SNRPGP15A8MWD9 76 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 SCGB1D2O95969 90 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 IL5P05113 134 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 ZNF688P0C7X2 276 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 NUP62P37198 522 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-211ENST00000590499 AP2S1P53680 142 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-211ENST00000590499 LYZP61626 148 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 SIGLEC15Q6ZMC9 328 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 TMEM182Q6ZP80 229 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-211ENST00000590499 TMEM144Q7Z5S9 345 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 C12orf45Q8N5I9 185 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-211ENST00000590499 RNF183Q96D59 192 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 PBDC1Q9BVG4 233 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 C11orf1Q9H5F2 150 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 SEPSECSQ9HD40 501 aaKnown RBP8.22□□□□□ -1.09
SMAD4-211ENST00000590499 NRN1Q9NPD7 142 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 GSKIPQ9P0R6 139 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
SMAD4-211ENST00000590499 C7orf66A4D0T2 115 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 FNDC10F2Z333 226 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 K7EPK0 472 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 SPRY2O43597 315 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 CFDP00746 253 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-211ENST00000590499 METTL15P1P0C7V9 234 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 DLK1P80370 383 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 AKR1C1Q04828 323 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 IL15RAQ13261 267 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 C1orf194Q5T5A4 169 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 TRPT1Q86TN4 253 aaKnown RBP8.21□□□□□ -1.1
SMAD4-211ENST00000590499 CSTL1Q9H114 145 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 SLC45A2Q9UMX9 530 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 ALMS1Q8TCU4 4167 aa8.21□□□□□ -1.1
SMAD4-211ENST00000590499 GIG44P09565 113 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-211ENST00000590499 GATA2P23769 480 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-211ENST00000590499 ARL16Q0P5N6 197 aa8.2□□□□□ -1.1
SMAD4-211ENST00000590499 ZFAND6Q6FIF0 208 aa8.2□□□□□ -1.1
SMAD4-211ENST00000590499 ENKURQ8TC29 256 aa8.2□□□□□ -1.1
SMAD4-211ENST00000590499 C2orf50Q96LR7 162 aa8.2□□□□□ -1.1
SMAD4-211ENST00000590499 PFDN2Q9UHV9 154 aa8.2□□□□□ -1.1
SMAD4-211ENST00000590499 KNCNA6PVL3 124 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 FAM25EA8MYX2 175 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 SOCS3O14543 225 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 PLP1P60201 277 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 PSMG4Q5JS54 123 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 CYP2G1PQ6ZSU1 146 aa8.19□□□□□ -1.1
SMAD4-211ENST00000590499 NRARPQ7Z6K4 114 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms