RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 KCNIP2Q9NS61 270 aa9.73□□□□□ -0.85
DDX39A-213ENST00000590315 HIGD1AQ9Y241 93 aa9.73□□□□□ -0.85
DDX39A-213ENST00000590315 ZNF256Q9Y2P7 627 aaPredicted RBP9.73□□□□□ -0.85
DDX39A-213ENST00000590315 LSM4Q9Y4Z0 139 aaKnown RBP9.73□□□□□ -0.85
DDX39A-213ENST00000590315 PXMP4Q9Y6I8 212 aa9.73□□□□□ -0.85
DDX39A-213ENST00000590315 NOTCH3Q9UM47 2321 aa9.73□□□□□ -0.85
DDX39A-213ENST00000590315 SORL1Q92673 2214 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 RNF222A6NCQ9 220 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 C8orf88P0DMB2 117 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 GP9P14770 177 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 CRYBB3P26998 211 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 KRTAP10-11P60412 298 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 B2MP61769 119 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 ZNF266Q14584 549 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 OPCMLQ14982 345 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 ST6GAL2Q96JF0 529 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 WDR61Q9GZS3 305 aaKnown RBP9.72□□□□□ -0.85
DDX39A-213ENST00000590315 SLC45A2Q9UMX9 530 aa9.72□□□□□ -0.85
DDX39A-213ENST00000590315 BORCS7-ASMTA0A0B4J1R7 106 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 DNASE2O00115 360 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-213ENST00000590315 C10orf113Q5VZT2 155 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 S100A7AQ86SG5 101 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 GTSCR1Q86UQ5 136 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 WFDC3Q8IUB2 231 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 HSD17B11Q8NBQ5 300 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 STXBP6Q8NFX7 210 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 OR1L4Q8NGR5 311 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 RSG1Q9BU20 258 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 WFDC1Q9HC57 220 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 SLC39A9Q9NUM3 307 aa9.71□□□□□ -0.86
DDX39A-213ENST00000590315 WIPF1O43516 503 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 PFDN1O60925 122 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 PAFAH1B2P68402 229 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 EGFEM1PQ0D2K5 195 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 SIGLEC15Q6ZMC9 328 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 TCTE3Q8IZS6 198 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 OR8I2Q8N0Y5 310 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 UHRF2Q96PU4 802 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 PFDN5Q99471 154 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 SCRT1Q9BWW7 348 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 ARV1Q9H2C2 271 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
DDX39A-213ENST00000590315 AURKAIP1Q9NWT8 199 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-213ENST00000590315 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 KANTRA0A1W2PQU2 76 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 HELTA6NFD8 242 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 RPL29P47914 159 aaKnown RBP9.69□□□□□ -0.86
DDX39A-213ENST00000590315 CD81P60033 236 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 DEFA6Q01524 100 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 FFAR4Q5NUL3 377 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 PXDC1Q5TGL8 231 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 LEMD1Q68G75 181 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 C16orf54Q6UWD8 224 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 OR11H4Q8NGC9 324 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 ARPC5LQ9BPX5 153 aa9.69□□□□□ -0.86
DDX39A-213ENST00000590315 SLC25A39Q9BZJ4 359 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-213ENST00000590315 A0A0D9SG52 128 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 OR4C46A6NHA9 309 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 ZNF98A6NK75 572 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 HMSDA8MTL9 139 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 H3BRN7 92 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 C1QBP02746 253 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 CD5P06127 495 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 ATF4P18848 351 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-213ENST00000590315 PLP1P60201 277 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 PRR20EP86478 221 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 PRR20CP86479 221 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 PRR20DP86480 221 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 PRR20BP86481 221 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 PRR20AP86496 221 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 ZFP69Q49AA0 526 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 KPRPQ5T749 579 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-213ENST00000590315 RPL7L1Q6DKI1 246 aaKnown RBP9.68□□□□□ -0.86
DDX39A-213ENST00000590315 LINC00305Q7Z4B0 112 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 GLMPQ8WWB7 406 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 SPAG8Q99932 426 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-213ENST00000590315 U3KQE9 123 aa9.68□□□□□ -0.86
DDX39A-213ENST00000590315 ELOA3CA0A087WX78 387 aaPredicted RBP9.67□□□□□ -0.86
DDX39A-213ENST00000590315 ZNF785A8K8V0 405 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 TAAR5O14804 337 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 TSPAN4O14817 238 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 BUB3O43684 328 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 GALR1P47211 349 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 CD300CQ08708 224 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 ZNF345Q14585 488 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 KCNRGQ8N5I3 272 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 SHANK2-AS3Q9BTD1 123 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 PARD6GQ9BYG4 376 aaPredicted RBP9.67□□□□□ -0.86
DDX39A-213ENST00000590315 SLC25A32Q9H2D1 315 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 MS4A6AQ9H2W1 248 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 DNAJC4Q9NNZ3 241 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 UBQLN2Q9UHD9 624 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 RNF24Q9Y225 148 aa9.67□□□□□ -0.86
DDX39A-213ENST00000590315 CXCL2P19875 107 aa9.66□□□□□ -0.86
DDX39A-213ENST00000590315 DEFB121Q5J5C9 76 aa9.66□□□□□ -0.86
DDX39A-213ENST00000590315 GCSAMLQ5JQS6 135 aa9.66□□□□□ -0.86
DDX39A-213ENST00000590315 C1orf194Q5T5A4 169 aa9.66□□□□□ -0.86
DDX39A-213ENST00000590315 FAM78BQ5VT40 261 aa9.66□□□□□ -0.86
DDX39A-213ENST00000590315 PATE2Q6UY27 113 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms