RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, human

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-223	ENST00000590215	PAFAH1B2	P68402	229 aa		13.98	□□□□□ -0.17
MBD1-223	ENST00000590215	C1orf194	Q5T5A4	169 aa		13.98	□□□□□ -0.17
MBD1-223	ENST00000590215	ZNF546	Q86UE3	836 aa		13.98	□□□□□ -0.17
MBD1-223	ENST00000590215	MS4A6A	Q9H2W1	248 aa		13.98	□□□□□ -0.17
MBD1-223	ENST00000590215	FRMD6-AS1	P0C7T7	363 aa		13.97	□□□□□ -0.17
MBD1-223	ENST00000590215	LINC00869	P0C866	280 aa		13.97	□□□□□ -0.17
MBD1-223	ENST00000590215	AP2S1	P53680	142 aa	Predicted RBP	13.97	□□□□□ -0.17
MBD1-223	ENST00000590215	ODF3L2	Q3SX64	289 aa		13.97	□□□□□ -0.17
MBD1-223	ENST00000590215	OR5C1	Q8NGR4	320 aa		13.97	□□□□□ -0.17
MBD1-223	ENST00000590215	ORM2	P19652	201 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	CAMLG	P49069	296 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	RAP2B	P61225	183 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	RAB31	Q13636	194 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	PXDC1	Q5TGL8	231 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	GBGT1	Q8N5D6	347 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	DEFB125	Q8N687	156 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	THAP6	Q8TBB0	222 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	DCANP1	Q8TF63	244 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	WFDC10A	Q9H1F0	79 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	HSPB11	Q9Y547	144 aa		13.96	□□□□□ -0.17
MBD1-223	ENST00000590215	IGKV3-7	A0A075B6H7	116 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215		K7EQG2	157 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	HYPM	O75409	117 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	RPL12	P30050	165 aa	Known RBP	13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	S100A7	P31151	101 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	CMC4	P56277	68 aa	Predicted RBP	13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	RPL11	P62913	178 aa	Known RBP	13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	FGL1	Q08830	312 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	SIGLEC15	Q6ZMC9	328 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	OR1B1	Q8NGR6	318 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	GGTLC1	Q9BX51	225 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	FBXL17	Q9UF56	701 aa		13.95	□□□□□ -0.18
MBD1-223	ENST00000590215	UBE2L5P	A0A1B0GUS4	154 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	ZNF98	A6NK75	572 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	DNASE2	O00115	360 aa	Predicted RBP	13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	MPDU1	O75352	247 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	RPL29	P47914	159 aa	Known RBP	13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	TFPI2	P48307	235 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	PRR20E	P86478	221 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	PRR20C	P86479	221 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	PRR20D	P86480	221 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	PRR20B	P86481	221 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	PRR20A	P86496	221 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	PATE2	Q6UY27	113 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	TUBA4B	Q9H853	241 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215	HIGD1A	Q9Y241	93 aa		13.94	□□□□□ -0.18
MBD1-223	ENST00000590215		H3BRN7	92 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	OPCML	Q14982	345 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215		Q5BKY6	102 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	STXBP6	Q8NFX7	210 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	PPP1R14B	Q96C90	147 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	CITED4	Q96RK1	184 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	SHANK2-AS3	Q9BTD1	123 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	SRD5A3	Q9H8P0	318 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	NRN1	Q9NPD7	142 aa		13.93	□□□□□ -0.18
MBD1-223	ENST00000590215	COL7A1	Q02388	2944 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	RBMY1B	A6NDE4	496 aa	Known RBP	13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	RBMY1E	A6NEQ0	496 aa	Known RBP	13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	RBMY1D	P0C7P1	496 aa	Known RBP	13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	NHLRC4	P0CG21	123 aa	Predicted RBP	13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	FGF7	P21781	194 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	CLINT1	Q14677	625 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	MIC13	Q5XKP0	118 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	S100A7A	Q86SG5	101 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	WFDC3	Q8IUB2	231 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	SBSPON	Q8IVN8	264 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	OR8I2	Q8N0Y5	310 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	ARL6	Q9H0F7	186 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	MAP6D1	Q9H9H5	199 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	SEPSECS	Q9HD40	501 aa	Known RBP	13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	DOK5	Q9P104	306 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	UBQLN2	Q9UHD9	624 aa		13.92	□□□□□ -0.18
MBD1-223	ENST00000590215	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.91	□□□□□ -0.18
MBD1-223	ENST00000590215	FAM24B	Q8N5W8	94 aa		13.91	□□□□□ -0.18
MBD1-223	ENST00000590215	TMEM37	Q8WXS4	190 aa		13.91	□□□□□ -0.18
MBD1-223	ENST00000590215	GPR82	Q96P67	336 aa		13.91	□□□□□ -0.18
MBD1-223	ENST00000590215	AQP10	Q96PS8	301 aa		13.91	□□□□□ -0.18
MBD1-223	ENST00000590215	ATP5S	Q99766	215 aa		13.91	□□□□□ -0.18
MBD1-223	ENST00000590215	NPCDR1	Q9BY65	106 aa		13.91	□□□□□ -0.18
MBD1-223	ENST00000590215	WDR61	Q9GZS3	305 aa	Known RBP	13.91	□□□□□ -0.18
MBD1-223	ENST00000590215	ARV1	Q9H2C2	271 aa		13.91	□□□□□ -0.18
MBD1-223	ENST00000590215		G3V3Q6	166 aa		13.9	□□□□□ -0.18
MBD1-223	ENST00000590215	OR5G3	P0C626	314 aa		13.9	□□□□□ -0.18
MBD1-223	ENST00000590215	OR2T35	Q8NGX2	323 aa		13.9	□□□□□ -0.18
MBD1-223	ENST00000590215	SLC25A32	Q9H2D1	315 aa		13.9	□□□□□ -0.18
MBD1-223	ENST00000590215	B2M	P61769	119 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	HAGH	Q16775	308 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215		Q6ZRG5	221 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	C17orf77	Q96MU5	243 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	UHRF2	Q96PU4	802 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	ASCL2	Q99929	193 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	SCRT1	Q9BWW7	348 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	SLC25A22	Q9H936	323 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	DNAJC4	Q9NNZ3	241 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	SLC39A9	Q9NUM3	307 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	RNF24	Q9Y225	148 aa		13.89	□□□□□ -0.19
MBD1-223	ENST00000590215	PXMP4	Q9Y6I8	212 aa		13.89	□□□□□ -0.19

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