RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 FCN1O00602 326 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 GCGP01275 180 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 IGHV3-48P01763 117 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 PYYP10082 97 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 GP9P14770 177 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 ORM2P19652 201 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 ZFP36P26651 326 aaKnown RBP7.88□□□□□ -1.15
VPS25-202ENST00000589219 UBE2E1P51965 193 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 SUMO1P63165 101 aaKnown RBP7.88□□□□□ -1.15
VPS25-202ENST00000589219 HES1Q14469 280 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 RPEL1Q2QD12 228 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 COX19Q49B96 90 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 PRIMA1Q86XR5 153 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 TMEM183AQ8IXX5 376 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 RASL11BQ9BPW5 248 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 LPAR2Q9HBW0 351 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 GAR1Q9NY12 217 aaKnown RBP7.88□□□□□ -1.15
VPS25-202ENST00000589219 C1RLQ9NZP8 487 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 TMEM14CQ9P0S9 112 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 DMRT1Q9Y5R6 373 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 CR1P17927 2039 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 TRBV9A0A0B4J1U6 114 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 A0A0U1RQK1 487 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 ZNF320A2RRD8 509 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 K7EIM0 57 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 ISLRO14498 428 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 LCE2BO14633 110 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 CRLF1O75462 422 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 TOX4O94842 621 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 TOMM40O96008 361 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 APELAP0DMC3 54 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 HIST1H1BP16401 226 aaKnown RBP7.87□□□□□ -1.15
VPS25-202ENST00000589219 TMEM11P17152 192 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 BRS3P32247 399 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 MYCNOSP40205 109 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 ERVFC1-1P60608 527 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 RPL15P61313 204 aaKnown RBP7.87□□□□□ -1.15
VPS25-202ENST00000589219 LYZP61626 148 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 DNLZQ5SXM8 178 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 ZNF562Q6V9R5 426 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 C19orf35Q6ZS72 473 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 RBM14Q96PK6 669 aaKnown RBP7.87□□□□□ -1.15
VPS25-202ENST00000589219 CHRDL1Q9BU40 450 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 BPESC1Q9GZL8 116 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 AURKAIP1Q9NWT8 199 aaPredicted RBP7.87□□□□□ -1.15
VPS25-202ENST00000589219 RNF24Q9Y225 148 aa7.87□□□□□ -1.15
VPS25-202ENST00000589219 POLR3KQ9Y2Y1 108 aaPredicted RBP7.87□□□□□ -1.15
VPS25-202ENST00000589219 MALRD1Q5VYJ5 2156 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 IGLV11-55A0A075B6I3 123 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 NDUFS7O75251 213 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 IGHV4-39P01824 125 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 HLA-DRB1P01911 266 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 FAM106CPP0CH98 169 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 HNF1AP20823 631 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 DSCR9P59020 149 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 YPEL3P61236 119 aaPredicted RBP7.86□□□□□ -1.15
VPS25-202ENST00000589219 LMO4P61968 165 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 FAM231DQ6ZW35 169 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 TTC9CQ8N5M4 171 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 C5orf17Q8NAS9 161 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 TBX15Q96SF7 602 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 PIMREGQ9BSJ6 248 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 THYN1Q9P016 225 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 V9GYV3 84 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 ABCA1O95477 2261 aa7.86□□□□□ -1.15
VPS25-202ENST00000589219 IGHV3-21A0A0B4J1V1 117 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 A0A1W2PRD5 423 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 A0A1W2PRF3 423 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 A0A1W2PRM7 423 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 IFITM10A6NMD0 228 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 H3BRN7 92 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 NDUFS8O00217 210 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 IGKV1-17P01599 117 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 IGLV2-8P01709 118 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 MT-ND6P03923 174 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 SLC25A5P05141 298 aaKnown RBP7.85□□□□□ -1.15
VPS25-202ENST00000589219 RD3LP0DJH9 198 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 PSG1P11464 419 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 S100A7P31151 101 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 UBE2G1P62253 170 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 TMEM183BQ1AE95 376 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 IBA57Q5T440 356 aaKnown RBP7.85□□□□□ -1.15
VPS25-202ENST00000589219 RUSC1-AS1Q66K80 236 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 WDR73Q6P4I2 378 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 CLEC2AQ6UVW9 174 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 MAPK1IP1LQ8NDC0 245 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 FMC1Q96HJ9 113 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 TMEM68Q96MH6 324 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 ATG101Q9BSB4 218 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 SLC25A39Q9BZJ4 359 aaPredicted RBP7.85□□□□□ -1.15
VPS25-202ENST00000589219 OTORQ9NRC9 128 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 MRPL27Q9P0M9 148 aaKnown RBP7.85□□□□□ -1.15
VPS25-202ENST00000589219 TRAPPC1Q9Y5R8 145 aa7.85□□□□□ -1.15
VPS25-202ENST00000589219 TNCP24821 2201 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 XKRY2A2RUG3 117 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 NCBP2LA6PVI3 153 aaKnown RBP7.84□□□□□ -1.15
VPS25-202ENST00000589219 CD5LO43866 347 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 NBEAP1P0C6P0 100 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 HIST1H1EP10412 219 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms