RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 K7EQM0 130 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 SPINK4O60575 86 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 MOSP00540 346 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 PAX1P15863 534 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 S100A7P31151 101 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 GPR6P46095 362 aaPredicted RBP5.9□□□□□ -1.47
ZNF540-206ENST00000589117 TCL1AP56279 114 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 MRGPRG-AS1Q2M3A8 158 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 TPTE2P1Q5T6R2 138 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 TMEM136Q6ZRR5 245 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 NUDT10Q8NFP7 164 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 OR11H6Q8NGC7 330 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 TSKUQ8WUA8 353 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 NUDT11Q96G61 164 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 NDUFAF3Q9BU61 184 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 TMEM14CQ9P0S9 112 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 SOX21Q9Y651 276 aaPredicted RBP5.9□□□□□ -1.47
ZNF540-206ENST00000589117 ANKRD11Q6UB99 2663 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-206ENST00000589117 LOC105371242A0A075B767 164 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 TEX22C9J3V5 150 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 LY6LH3BQJ8 138 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 NBR2O15453 112 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 GYPEP15421 78 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 MYCNOSP40205 109 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 MFAP2P55001 183 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 LYZP61626 148 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 C1orf194Q5T5A4 169 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 PRR27Q6MZM9 219 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 MRPL54Q6P161 138 aaKnown RBP5.89□□□□□ -1.47
ZNF540-206ENST00000589117 BPIFA4PQ86YQ2 179 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 LINC00479Q96M42 142 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 SSBP3Q9BWW4 388 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-206ENST00000589117 THYN1Q9P016 225 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 GVINP1Q7Z2Y8 2422 aa5.89□□□□□ -1.47
ZNF540-206ENST00000589117 PTPRZ1P23471 2315 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-206ENST00000589117 TRAV34A0A0B4J273 112 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 OOSP1A8MZH6 123 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 TIMM23O14925 209 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 TOMM40O96008 361 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 P01737 135 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 APELAP0DMC3 54 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 PSG1P11464 419 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 PRTN3P24158 256 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 CNTFRP26992 372 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 ARF6P62330 175 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 SLC35B1P78383 322 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 LYPD1Q8N2G4 141 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 NHLRC2Q8NBF2 726 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 OR4F17Q8NGA8 305 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 HSPB9Q9BQS6 159 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 Q9H3A6 140 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 GNB4Q9HAV0 340 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 OTORQ9NRC9 128 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 MRPL36Q9P0J6 103 aaKnown RBP5.88□□□□□ -1.47
ZNF540-206ENST00000589117 AKAP13Q12802 2813 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 LAMA5O15230 3695 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 ROS1P08922 2347 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 FAM231BA6NCW3 169 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 GPX1P07203 203 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 IGLC1P0CG04 106 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 SFTPCP11686 197 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 HES1Q14469 280 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 TOMM20LQ6UXN7 152 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 ZNF600Q6ZNG1 722 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 BORCS7Q96B45 105 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 KCNS1Q96KK3 526 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 TBX15Q96SF7 602 aa5.88□□□□□ -1.47
ZNF540-206ENST00000589117 SLC25A39Q9BZJ4 359 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-206ENST00000589117 MRPL27Q9P0M9 148 aaKnown RBP5.88□□□□□ -1.47
ZNF540-206ENST00000589117 IGHV3-21A0A0B4J1V1 117 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 HIGD1CA8MV81 97 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 I3L2K1 104 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 NUPR1O60356 82 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 APC2O95996 2303 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 TCRAP04437 139 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 GP9P14770 177 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 SRIP30626 198 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 AMTP48728 403 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 C19orf35Q6ZS72 473 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 NUP35Q8NFH5 326 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 NPBQ8NG41 125 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 MBD6Q96DN6 1003 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 VAMP8Q9BV40 100 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 GFRA4Q9GZZ7 299 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 RPP21Q9H633 154 aaKnown RBP5.87□□□□□ -1.47
ZNF540-206ENST00000589117 ZNF492Q9P255 531 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 RPH3ALQ9UNE2 315 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 HILPDAQ9Y5L2 63 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 GNG7O60262 68 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 LTAP01374 205 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 KIR3DL3Q8N743 410 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 OR4B1Q8NGF8 309 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 RNF125Q96EQ8 232 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 MLST8Q9BVC4 326 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 PCNX1Q96RV3 2341 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 PIEZO2Q9H5I5 2752 aa5.87□□□□□ -1.47
ZNF540-206ENST00000589117 ARFGEF3Q5TH69 2177 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 A0A1B0GUS0 222 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 M0QZK8 103 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 BMPR1BO00238 502 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms