RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 SLC35E1Q96K37 410 aa8.66□□□□□ -1.02
RFX1-204ENST00000588885 FAM110AQ9BQ89 295 aa8.66□□□□□ -1.02
RFX1-204ENST00000588885 SPATA25Q9BR10 227 aa8.66□□□□□ -1.02
RFX1-204ENST00000588885 MRPL27Q9P0M9 148 aaKnown RBP8.66□□□□□ -1.02
RFX1-204ENST00000588885 DYNC2H1Q8NCM8 4307 aaKnown RBP8.66□□□□□ -1.02
RFX1-204ENST00000588885 IGHV3-49A0A0A0MS15 119 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 BORCS7-ASMTA0A0B4J1R7 106 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 RPS10-NUDT3A0A1W2PQS6 291 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 CTSGP08311 255 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 C8orf88P0DMB2 117 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 C4BPBP20851 252 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 FGF7P21781 194 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 MFAP4P55083 255 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 AKR1C1Q04828 323 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 ZNF266Q14584 549 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 ATP6V1FQ16864 119 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 SPSB3Q6PJ21 355 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 STOML3Q8TAV4 291 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 TMEM190Q8WZ59 177 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 GGACTQ9BVM4 153 aa8.65□□□□□ -1.02
RFX1-204ENST00000588885 WDR61Q9GZS3 305 aaKnown RBP8.65□□□□□ -1.02
RFX1-204ENST00000588885 SACSQ9NZJ4 4579 aa8.65□□□□□ -1.03
RFX1-204ENST00000588885 IGHV3OR16-13A0A075B7E8 117 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 IGHV3-74A0A0B4J1X5 117 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 NDUFA4O00483 81 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 NUPL2O15504 423 aaKnown RBP8.64□□□□□ -1.03
RFX1-204ENST00000588885 CFDP00746 253 aaPredicted RBP8.64□□□□□ -1.03
RFX1-204ENST00000588885 IFNA5P01569 189 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 TPT1P13693 172 aaKnown RBP8.64□□□□□ -1.03
RFX1-204ENST00000588885 GPX4P36969 197 aaPredicted RBP8.64□□□□□ -1.03
RFX1-204ENST00000588885 RND2P52198 227 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 ELLP55199 621 aaPredicted RBP8.64□□□□□ -1.03
RFX1-204ENST00000588885 GAMTQ14353 236 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 LINC00322Q6ZN03 302 aaPredicted RBP8.64□□□□□ -1.03
RFX1-204ENST00000588885 MARC2Q969Z3 335 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 ACY3Q96HD9 319 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 CITED4Q96RK1 184 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 RSG1Q9BU20 258 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 SH3BGRL3Q9H299 93 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 DAZ1Q9NQZ3 744 aaKnown RBP8.64□□□□□ -1.03
RFX1-204ENST00000588885 UBQLN2Q9UHD9 624 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 RFNGQ9Y644 331 aa8.64□□□□□ -1.03
RFX1-204ENST00000588885 FNDC10F2Z333 226 aa8.63□□□□□ -1.03
RFX1-204ENST00000588885 JTBO76095 146 aa8.63□□□□□ -1.03
RFX1-204ENST00000588885 ATP6V0CP27449 155 aa8.63□□□□□ -1.03
RFX1-204ENST00000588885 IFITM2Q01629 132 aa8.63□□□□□ -1.03
RFX1-204ENST00000588885 ZNF414Q96IQ9 312 aa8.63□□□□□ -1.03
RFX1-204ENST00000588885 MGST2Q99735 147 aa8.63□□□□□ -1.03
RFX1-204ENST00000588885 GINS3Q9BRX5 216 aa8.63□□□□□ -1.03
RFX1-204ENST00000588885 PARD6GQ9BYG4 376 aaPredicted RBP8.63□□□□□ -1.03
RFX1-204ENST00000588885 ARV1Q9H2C2 271 aa8.63□□□□□ -1.03
RFX1-204ENST00000588885 IGKV3-7A0A075B6H7 116 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 IGKV1D-37A0A075B6S9 117 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 IGKV1OR2-108A0A075B7D4 117 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 TRAV25A0A0B4J276 109 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 GNG7O60262 68 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 RELQ04864 619 aaPredicted RBP8.62□□□□□ -1.03
RFX1-204ENST00000588885 ETFRF1Q6IPR1 90 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 BAP18Q8IXM2 172 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 THAP8Q8NA92 274 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 NPIPB3Q92617 1050 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 ATP6V0BQ99437 205 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 GGTLC1Q9BX51 225 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 NPCDR1Q9BY65 106 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 GAR1Q9NY12 217 aaKnown RBP8.62□□□□□ -1.03
RFX1-204ENST00000588885 TENM2Q9NT68 2774 aa8.62□□□□□ -1.03
RFX1-204ENST00000588885 IGHV3-66A0A0C4DH42 116 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 K7EMT4 169 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 OR10J1P30954 320 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 TFPI2P48307 235 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 EIF5AP63241 154 aaKnown RBP8.61□□□□□ -1.03
RFX1-204ENST00000588885 ALKAL2Q6UX46 152 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 TMEM144Q7Z5S9 345 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 TMEM116Q8NCL8 245 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 OR4X1Q8NH49 305 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 SCGB1C1Q8TD33 95 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 TMED6Q8WW62 240 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 RNF2Q99496 336 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 TXN2Q99757 166 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 RHPN1-AS1Q9BWJ2 59 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 SLC25A32Q9H2D1 315 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 EDA2RQ9HAV5 297 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 NPVFQ9HCQ7 196 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 SMPXQ9UHP9 88 aa8.61□□□□□ -1.03
RFX1-204ENST00000588885 CSMD3Q7Z407 3707 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 IGHV7-4-1A0A0J9YVY3 117 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 CHEK1O14757 476 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 TSPAN4O14817 238 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 CLN5O75503 358 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 IGLC1P0CG04 106 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 NPBWR1P48145 328 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 CAMLGP49069 296 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 TIGITQ495A1 244 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 FAM74A1Q5RGS3 127 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 TEPPQ6URK8 271 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 TOMM20LQ6UXN7 152 aa8.6□□□□□ -1.03
RFX1-204ENST00000588885 TMEM182Q6ZP80 229 aaPredicted RBP8.6□□□□□ -1.03
RFX1-204ENST00000588885 GBGT1Q8N5D6 347 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms