RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 DCUN1D2Q6PH85 259 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 OR8D4Q8NGM9 314 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 PFN4Q8NHR9 129 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 C11orf40Q8WZ69 217 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 TMEM106AQ96A25 262 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 MAP1LC3BQ9GZQ8 125 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 PBOV1Q9GZY1 135 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 ZNF106Q9H2Y7 1883 aaKnown RBP3.9□□□□□ -1.79
VMP1-208ENST00000588617 SLIT2O94813 1529 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 MED1Q15648 1581 aaPredicted RBP3.89□□□□□ -1.79
VMP1-208ENST00000588617 A0A087X0T9 212 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 TRBV10-2A0A0K0K1G8 114 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 CBR1P16152 277 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 RRN3P1Q2M238 152 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 HCP5Q6MZN7 132 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 SIGLECL1Q8N7X8 197 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 DYDC1Q8WWB3 177 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 RGPD1P0DJD0 1748 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 CPDO75976 1380 aa3.89□□□□□ -1.79
VMP1-208ENST00000588617 ARHGAP32A7KAX9 2087 aa3.88□□□□□ -1.79
VMP1-208ENST00000588617 OVOS2A0A0G2JMS6 1433 aa3.88□□□□□ -1.79
VMP1-208ENST00000588617 TNS3Q68CZ2 1445 aa3.88□□□□□ -1.79
VMP1-208ENST00000588617 IGKV3D-11A0A0A0MRZ8 115 aa3.88□□□□□ -1.79
VMP1-208ENST00000588617 DUXBA0A1W2PPF3 345 aa3.88□□□□□ -1.79
VMP1-208ENST00000588617 PSMD8P48556 350 aa3.88□□□□□ -1.79
VMP1-208ENST00000588617 TMEM78Q5T7P6 136 aa3.88□□□□□ -1.79
VMP1-208ENST00000588617 WFDC5Q8TCV5 224 aa3.88□□□□□ -1.79
VMP1-208ENST00000588617 PXDNQ92626 1479 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 ECM29Q5VYK3 1845 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 TMSB15BA0A087X1C1 80 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 CSN2P05814 226 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 FXYD2P54710 66 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 EIF5AP63241 154 aaKnown RBP3.87□□□□□ -1.79
VMP1-208ENST00000588617 SS18Q15532 418 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 KHDC3LQ587J8 217 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 PYDC1Q8WXC3 89 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 CKLFQ9UBR5 152 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 PCTPQ9UKL6 214 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 GREB1Q4ZG55 1949 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 PEAK1Q9H792 1746 aa3.87□□□□□ -1.79
VMP1-208ENST00000588617 MYH3P11055 1940 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 A0A0D9SEW6 157 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 TSTD3H0UI37 97 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 C19orf84I3L1E1 186 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 TAX1BP3O14907 124 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 PFDN1O60925 122 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 SRP14P37108 136 aaKnown RBP3.86□□□□□ -1.79
VMP1-208ENST00000588617 ZNF791Q3KP31 576 aaPredicted RBP3.86□□□□□ -1.79
VMP1-208ENST00000588617 DPPA3Q6W0C5 159 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 GRPEL2Q8TAA5 225 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 STAG3L4Q8TBR4 150 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 SLAMF6Q96DU3 332 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 OR2J1Q9GZK6 312 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 TMEM133Q9H2Q1 129 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 C19orf12Q9NSK7 152 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 ALS2Q96Q42 1657 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 MARF1Q9Y4F3 1742 aaKnown RBP3.86□□□□□ -1.79
VMP1-208ENST00000588617 STRCQ7RTU9 1775 aa3.86□□□□□ -1.79
VMP1-208ENST00000588617 MYH11P35749 1972 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 SDK2Q58EX2 2172 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 IGKV1-9A0A0C4DH69 117 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 HMSDA8MTL9 139 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 TRGC1P0CF51 173 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 S100GP29377 79 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 RELAQ04206 551 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 TMEM86AQ8N2M4 240 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 C10orf126Q8N4M7 172 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 OR5A1Q8NGJ0 315 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 PLEKHB2Q96CS7 222 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 ADAT3Q96EY9 351 aaPredicted RBP3.85□□□□□ -1.79
VMP1-208ENST00000588617 DNAJC30Q96LL9 226 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 HIST1H2BLQ99880 126 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 DOHHQ9BU89 302 aa3.85□□□□□ -1.79
VMP1-208ENST00000588617 MAP2P11137 1827 aaKnown RBP3.85□□□□□ -1.79
VMP1-208ENST00000588617 LRRC37A3O60309 1634 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 LMO7Q8WWI1 1683 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 STRCP1A6NGW2 1772 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 CCDC88AQ3V6T2 1871 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 MYH2Q9UKX2 1941 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 J3QQQ9 107 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 ORC5O43913 435 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 PEBP1P30086 187 aaKnown RBP3.84□□□□□ -1.79
VMP1-208ENST00000588617 RPL26P61254 145 aaKnown RBP3.84□□□□□ -1.79
VMP1-208ENST00000588617 NDUFA5Q16718 116 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 BCL2L15Q5TBC7 163 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 MED11Q9P086 117 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
VMP1-208ENST00000588617 RPL26L1Q9UNX3 145 aaKnown RBP3.84□□□□□ -1.79
VMP1-208ENST00000588617 IBTKQ9P2D0 1353 aaPredicted RBP3.84□□□□□ -1.79
VMP1-208ENST00000588617 FAM208AQ9UK61 1670 aaKnown RBP3.84□□□□□ -1.8
VMP1-208ENST00000588617 TMEM212A6NML5 194 aa3.83□□□□□ -1.8
VMP1-208ENST00000588617 C3orf84H3BNL1 204 aa3.83□□□□□ -1.8
VMP1-208ENST00000588617 TCL1BO95988 128 aa3.83□□□□□ -1.8
VMP1-208ENST00000588617 IGKV4-1P06312 121 aa3.83□□□□□ -1.8
VMP1-208ENST00000588617 LTC4SQ16873 150 aa3.83□□□□□ -1.8
VMP1-208ENST00000588617 LRRC28Q86X40 367 aaPredicted RBP3.83□□□□□ -1.8
VMP1-208ENST00000588617 RGPD8O14715 1765 aaPredicted RBP3.83□□□□□ -1.8
VMP1-208ENST00000588617 MALRD1Q5VYJ5 2156 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 CRYBG1Q9Y4K1 1723 aa3.82□□□□□ -1.8
VMP1-208ENST00000588617 ADAMTS7Q9UKP4 1686 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms