RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 RABAC1Q9UI14 185 aa11.69□□□□□ -0.54
NCLN-203ENST00000587740 ZNF785A8K8V0 405 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 CFDP00746 253 aaPredicted RBP11.68□□□□□ -0.54
NCLN-203ENST00000587740 APOHP02749 345 aaPredicted RBP11.68□□□□□ -0.54
NCLN-203ENST00000587740 HNRNPCP07910 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
NCLN-203ENST00000587740 CD7P09564 240 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 CRYBB3P26998 211 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 CD81P60033 236 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 USF2Q15853 346 aaPredicted RBP11.68□□□□□ -0.54
NCLN-203ENST00000587740 ATP6V1FQ16864 119 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 DEFB125Q8N687 156 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 BPIFCQ8NFQ6 507 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 ASB13Q8WXK3 278 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 ST8SIA2Q92186 375 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 RNF2Q99496 336 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 PBDC1Q9BVG4 233 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 VSIRQ9H7M9 311 aa11.68□□□□□ -0.54
NCLN-203ENST00000587740 IGHV3-66A0A0C4DH42 116 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 CD5P06127 495 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 GIPP09681 153 aaPredicted RBP11.67□□□□□ -0.54
NCLN-203ENST00000587740 LYZP61626 148 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 EWSR1Q01844 656 aaKnown RBP eCLIP11.67□□□□□ -0.54
NCLN-203ENST00000587740 BAXQ07812 192 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 CYP2G1PQ6ZSU1 146 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 THAP6Q8TBB0 222 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 GRAMD2BQ96HH9 432 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 NEURL2Q9BR09 285 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 UQCC1Q9NVA1 299 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 MBD2Q9UBB5 411 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 PFDN2Q9UHV9 154 aa11.67□□□□□ -0.54
NCLN-203ENST00000587740 TSPAN4O14817 238 aa11.66□□□□□ -0.54
NCLN-203ENST00000587740 GATA2P23769 480 aaPredicted RBP11.66□□□□□ -0.54
NCLN-203ENST00000587740 SELENOTP62341 195 aa11.66□□□□□ -0.54
NCLN-203ENST00000587740 NHLH2Q02577 135 aa11.66□□□□□ -0.54
NCLN-203ENST00000587740 FGL1Q08830 312 aa11.66□□□□□ -0.54
NCLN-203ENST00000587740 TCF24Q7RTU0 167 aa11.66□□□□□ -0.54
NCLN-203ENST00000587740 TMEM147Q9BVK8 224 aa11.66□□□□□ -0.54
NCLN-203ENST00000587740 DFFBO76075 338 aa11.65□□□□□ -0.54
NCLN-203ENST00000587740 NUP62P37198 522 aaPredicted RBP11.65□□□□□ -0.54
NCLN-203ENST00000587740 EIF2B2P49770 351 aaKnown RBP11.65□□□□□ -0.54
NCLN-203ENST00000587740 RAP2BP61225 183 aa11.65□□□□□ -0.54
NCLN-203ENST00000587740 RAB31Q13636 194 aa11.65□□□□□ -0.54
NCLN-203ENST00000587740 TMEM182Q6ZP80 229 aaPredicted RBP11.65□□□□□ -0.54
NCLN-203ENST00000587740 OR5C1Q8NGR4 320 aa11.65□□□□□ -0.54
NCLN-203ENST00000587740 PPP1R14BQ96C90 147 aa11.65□□□□□ -0.54
NCLN-203ENST00000587740 SPAG8Q99932 426 aaPredicted RBP11.65□□□□□ -0.54
NCLN-203ENST00000587740 SRD5A3Q9H8P0 318 aa11.65□□□□□ -0.54
NCLN-203ENST00000587740 U3KQE9 123 aa11.65□□□□□ -0.54
NCLN-203ENST00000587740 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.54
NCLN-203ENST00000587740 AGPAT2O15120 278 aa11.64□□□□□ -0.55
NCLN-203ENST00000587740 ORM2P19652 201 aa11.64□□□□□ -0.55
NCLN-203ENST00000587740 RPL12P30050 165 aaKnown RBP11.64□□□□□ -0.55
NCLN-203ENST00000587740 S100A7P31151 101 aa11.64□□□□□ -0.55
NCLN-203ENST00000587740 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
NCLN-203ENST00000587740 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
NCLN-203ENST00000587740 VWC2Q2TAL6 325 aa11.64□□□□□ -0.55
NCLN-203ENST00000587740 FAM90A2PQ658T7 463 aa11.64□□□□□ -0.55
NCLN-203ENST00000587740 ZNF546Q86UE3 836 aa11.64□□□□□ -0.55
NCLN-203ENST00000587740 RPP25LQ8N5L8 163 aaKnown RBP11.64□□□□□ -0.55
NCLN-203ENST00000587740 KIAA1109Q2LD37 5005 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 IGKV3-7A0A075B6H7 116 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 UBE2L5PA0A1B0GUS4 154 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 OR4C46A6NHA9 309 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 OR11H12B2RN74 326 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 SLC45A2Q9UMX9 530 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 WDR83OSQ9Y284 106 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
NCLN-203ENST00000587740 RYR1P21817 5038 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 HELTA6NFD8 242 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 DNASE2O00115 360 aaPredicted RBP11.62□□□□□ -0.55
NCLN-203ENST00000587740 BUB3O43684 328 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 LINC00869P0C866 280 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 CAMLGP49069 296 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 PMS2P11Q13670 270 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 CLINT1Q14677 625 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 MGST2Q99735 147 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
NCLN-203ENST00000587740 MPDU1O75352 247 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 HYPMO75409 117 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 FGF7P21781 194 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 TFPI2P48307 235 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 AP2S1P53680 142 aaPredicted RBP11.61□□□□□ -0.55
NCLN-203ENST00000587740 PLP1P60201 277 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 PXDC1Q5TGL8 231 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 S100A7AQ86SG5 101 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 GBGT1Q8N5D6 347 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 OR2T35Q8NGX2 323 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 GLMPQ8WWB7 406 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 DOK5Q9P104 306 aa11.61□□□□□ -0.55
NCLN-203ENST00000587740 CXorf65A6NEN9 183 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 OR5G3P0C626 314 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 WFDC3Q8IUB2 231 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 STXBP6Q8NFX7 210 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 GGTLC1Q9BX51 225 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 ARL6Q9H0F7 186 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 MS4A6AQ9H2W1 248 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 FBXL17Q9UF56 701 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms