RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ANXA3P12429 323 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 ALDH3B2P48448 385 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 OR2F1Q13607 317 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 LGALS9BQ3B8N2 356 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 FAM222AQ5U5X8 452 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 SPATA31B1PQ5VZV4 182 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 GSG1LQ6UXU4 331 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 PPP1R14BQ96C90 147 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 FAM210BQ96KR6 192 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 NIPSNAP3BQ9BS92 247 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 CCDC59Q9P031 241 aaKnown RBP13.79□□□□□ -0.2
TRAF4-216ENST00000586813 DNAH11Q96DT5 4516 aa13.79□□□□□ -0.2
TRAF4-216ENST00000586813 SNRPGP15A8MWD9 76 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 PAX9P55771 341 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 PSG9Q00887 426 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 EBLN2Q6P2I7 272 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 UBE2DNLQ8IWF7 75 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 OR8I2Q8N0Y5 310 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 DYNC2LI1Q8TCX1 351 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 TRGV9Q99603 122 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 RSL24D1Q9UHA3 163 aaKnown RBP13.78□□□□□ -0.2
TRAF4-216ENST00000586813 GOLT1BQ9Y3E0 138 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 NACAE9PAV3 2078 aa13.78□□□□□ -0.2
TRAF4-216ENST00000586813 F6UB75 175 aa13.77□□□□□ -0.21
TRAF4-216ENST00000586813 PITX3O75364 302 aa13.77□□□□□ -0.21
TRAF4-216ENST00000586813 IFNA21P01568 189 aa13.77□□□□□ -0.21
TRAF4-216ENST00000586813 MED14OSP0DP75 135 aa13.77□□□□□ -0.21
TRAF4-216ENST00000586813 FAM78BQ5VT40 261 aa13.77□□□□□ -0.21
TRAF4-216ENST00000586813 SAMD13Q5VXD3 122 aa13.77□□□□□ -0.21
TRAF4-216ENST00000586813 IGLV2-18A0A075B6J9 118 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 IGKV1OR2-108A0A075B7D4 117 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 PIGBOS1A0A0B4J2F0 54 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 HBE1P02100 147 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 IAPPP10997 89 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 RAB11AP62491 216 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 C1orf158Q8N1D5 194 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 THAP8Q8NA92 274 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 RAB2BQ8WUD1 216 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 C7orf50Q9BRJ6 194 aaKnown RBP13.76□□□□□ -0.21
TRAF4-216ENST00000586813 PLA2G2EQ9NZK7 142 aa13.76□□□□□ -0.21
TRAF4-216ENST00000586813 YTHDF2Q9Y5A9 579 aaKnown RBP13.76□□□□□ -0.21
TRAF4-216ENST00000586813 A0A0J9YX75 114 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 LOC102723971A0A1B0GUV8 181 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 DUXBA0A1W2PPF3 345 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 HTN3P15516 51 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 MEOX2P50222 304 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 OXA1LQ15070 435 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 Q6ZR54 194 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 C20orf173Q96LM9 149 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 RPRMQ9NS64 109 aa13.75□□□□□ -0.21
TRAF4-216ENST00000586813 TMED4Q7Z7H5 227 aa13.74□□□□□ -0.21
TRAF4-216ENST00000586813 C16orf92Q96LL3 132 aa13.74□□□□□ -0.21
TRAF4-216ENST00000586813 SLC25A32Q9H2D1 315 aa13.74□□□□□ -0.21
TRAF4-216ENST00000586813 DOK5Q9P104 306 aa13.74□□□□□ -0.21
TRAF4-216ENST00000586813 PAIP2BQ9ULR5 123 aaKnown RBP13.74□□□□□ -0.21
TRAF4-216ENST00000586813 A8MTW9 85 aa13.73□□□□□ -0.21
TRAF4-216ENST00000586813 CFDP00746 253 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-216ENST00000586813 GALR1P47211 349 aa13.73□□□□□ -0.21
TRAF4-216ENST00000586813 RRN3P1Q2M238 152 aa13.73□□□□□ -0.21
TRAF4-216ENST00000586813 SOSTQ9BQB4 213 aa13.73□□□□□ -0.21
TRAF4-216ENST00000586813 SLC25A22Q9H936 323 aa13.73□□□□□ -0.21
TRAF4-216ENST00000586813 SLC45A2Q9UMX9 530 aa13.73□□□□□ -0.21
TRAF4-216ENST00000586813 MUC4Q99102 2169 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 FABP12A6NFH5 140 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 SLC25A6P12236 298 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 RNF212Q495C1 297 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 TMEM128Q5BJH2 165 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 GGNBP1Q5YKI7 109 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 TMEM88Q6PEY1 159 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 C17orf77Q96MU5 243 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 BCL7BQ9BQE9 202 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 SLIRPQ9GZT3 109 aaKnown RBP13.72□□□□□ -0.21
TRAF4-216ENST00000586813 MAGT1Q9H0U3 335 aa13.72□□□□□ -0.21
TRAF4-216ENST00000586813 RYR1P21817 5038 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 ZNF98A6NK75 572 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 PRSS46E5RG02 174 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 MED6O75586 246 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 VAMP1P23763 118 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 TNFSF8P32971 234 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 FAUP35544 74 aaKnown RBP13.71□□□□□ -0.21
TRAF4-216ENST00000586813 TMBIM6P55061 237 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 DAD1P61803 113 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 LRTM2Q8N967 370 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 IGF2BP2-AS1Q96M15 143 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 CIB3Q96Q77 187 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-216ENST00000586813 RSG1Q9BU20 258 aa13.71□□□□□ -0.21
TRAF4-216ENST00000586813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.7□□□□□ -0.22
TRAF4-216ENST00000586813 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
TRAF4-216ENST00000586813 TRIM63Q969Q1 353 aa13.7□□□□□ -0.22
TRAF4-216ENST00000586813 TMEM208Q9BTX3 173 aa13.7□□□□□ -0.22
TRAF4-216ENST00000586813 ORM2P19652 201 aa13.69□□□□□ -0.22
TRAF4-216ENST00000586813 RPP30P78346 268 aaKnown RBP13.69□□□□□ -0.22
TRAF4-216ENST00000586813 SOHLH1Q5JUK2 328 aa13.69□□□□□ -0.22
TRAF4-216ENST00000586813 BPIFCQ8NFQ6 507 aa13.69□□□□□ -0.22
TRAF4-216ENST00000586813 OR1B1Q8NGR6 318 aa13.69□□□□□ -0.22
TRAF4-216ENST00000586813 TMED3Q9Y3Q3 217 aa13.69□□□□□ -0.22
TRAF4-216ENST00000586813 WRBO00258 174 aa13.68□□□□□ -0.22
TRAF4-216ENST00000586813 SYNGR2O43760 224 aa13.68□□□□□ -0.22
TRAF4-216ENST00000586813 GATA2P23769 480 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms