RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 TMEM144Q7Z5S9 345 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 THAP8Q8NA92 274 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 GLMPQ8WWB7 406 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 LINC00052Q96N35 136 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 SLC25A22Q9H936 323 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 TBC1D24Q9ULP9 559 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 RNF24Q9Y225 148 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 RCL1Q9Y2P8 373 aaKnown RBP8.06□□□□□ -1.12
CLIP3-203ENST00000586457 NBEAL2Q6ZNJ1 2754 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 TENM3Q9P273 2699 aa8.06□□□□□ -1.12
CLIP3-203ENST00000586457 IGKV1D-37A0A075B6S9 117 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 C7orf66A4D0T2 115 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 INMT-MINDY4F8WBC2 141 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 PRAF2O60831 178 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 HYPMO75409 117 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 CA1P00915 261 aaPredicted RBP8.05□□□□□ -1.12
CLIP3-203ENST00000586457 OR5G3P0C626 314 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 DLK1P80370 383 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 ACTL10Q5JWF8 245 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 CASC10Q5T4H9 136 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 CYP2G1PQ6ZSU1 146 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 STX12Q86Y82 276 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 RARRES2Q99969 163 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 OVOL2Q9BRP0 275 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 GGACTQ9BVM4 153 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 EDA2RQ9HAV5 297 aa8.05□□□□□ -1.12
CLIP3-203ENST00000586457 SSNA1O43805 119 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 MEOX2P50222 304 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 HBG1P69891 147 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 HBG2P69892 147 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 CYCSP99999 105 aaKnown RBP8.04□□□□□ -1.12
CLIP3-203ENST00000586457 TMEM41BQ5BJD5 291 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 MORN3Q6PF18 240 aaPredicted RBP8.04□□□□□ -1.12
CLIP3-203ENST00000586457 TMEM14EPQ6UXP3 125 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 NRARPQ7Z6K4 114 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 FAM24BQ8N5W8 94 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 LRRC20Q8TCA0 184 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 DCANP1Q8TF63 244 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 GATAD1Q8WUU5 269 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 RNF183Q96D59 192 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 GPR82Q96P67 336 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 SEPSECSQ9HD40 501 aaKnown RBP8.04□□□□□ -1.12
CLIP3-203ENST00000586457 SLC45A2Q9UMX9 530 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 HIGD1AQ9Y241 93 aa8.04□□□□□ -1.12
CLIP3-203ENST00000586457 IGKV1OR2-108A0A075B7D4 117 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 KNCNA6PVL3 124 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 PRSS46E5RG02 174 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 FNDC10F2Z333 226 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 K7EPK0 472 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 DEDDO75618 318 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 LINC00869P0C866 280 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 SPP1P10451 314 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 ATF4P18848 351 aaPredicted RBP8.03□□□□□ -1.12
CLIP3-203ENST00000586457 GATA2P23769 480 aaPredicted RBP8.03□□□□□ -1.12
CLIP3-203ENST00000586457 PAX9P55771 341 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 FGL1Q08830 312 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 SLC38A11Q08AI6 406 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 EBLN2Q6P2I7 272 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 Q6ZRG5 221 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 ZNF546Q86UE3 836 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 C16orf92Q96LL3 132 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 RSG1Q9BU20 258 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 ARL6Q9H0F7 186 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 DOK5Q9P104 306 aa8.03□□□□□ -1.12
CLIP3-203ENST00000586457 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 CXorf65A6NEN9 183 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 ZNF98A6NK75 572 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 CST7O76096 145 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 S100A11P31949 105 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 PSMB3P49720 205 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 PXDC1Q5TGL8 231 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 OR11H2Q8NH07 326 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 C1QTNF4Q9BXJ3 329 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 SLC25A31Q9H0C2 315 aa8.02□□□□□ -1.13
CLIP3-203ENST00000586457 FAM24AA6NFZ4 105 aa8.01□□□□□ -1.13
CLIP3-203ENST00000586457 ISLRO14498 428 aa8.01□□□□□ -1.13
CLIP3-203ENST00000586457 COX7A2P2O60397 106 aa8.01□□□□□ -1.13
CLIP3-203ENST00000586457 CCNKO75909 580 aa8.01□□□□□ -1.13
CLIP3-203ENST00000586457 RPL7P18124 248 aaKnown RBP8.01□□□□□ -1.13
CLIP3-203ENST00000586457 SULT1A1P50225 295 aa8.01□□□□□ -1.13
CLIP3-203ENST00000586457 RAB32Q13637 225 aa8.01□□□□□ -1.13
CLIP3-203ENST00000586457 RPRMQ9NS64 109 aa8.01□□□□□ -1.13
CLIP3-203ENST00000586457 UQCC1Q9NVA1 299 aa8.01□□□□□ -1.13
CLIP3-203ENST00000586457 STAB2Q8WWQ8 2551 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 DNAH9Q9NYC9 4486 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 PMS2P5A8MQ11 134 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 AGPAT2O15120 278 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 SIX6O95475 246 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 IGKV3-20P01619 116 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 PET100P0DJ07 73 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 CAMLGP49069 296 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 BAXQ07812 192 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 ATP6V1FQ16864 119 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 LRRC37A5PQ49AS3 106 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 SPATA31B1PQ5VZV4 182 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 TMEM182Q6ZP80 229 aaPredicted RBP8□□□□□ -1.13
CLIP3-203ENST00000586457 TRPT1Q86TN4 253 aaKnown RBP8□□□□□ -1.13
CLIP3-203ENST00000586457 OR4B1Q8NGF8 309 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 MARVELD1Q9BSK0 173 aa8□□□□□ -1.13
CLIP3-203ENST00000586457 SLC25A39Q9BZJ4 359 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms