RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 NRN1Q9NPD7 142 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 MGAT4CQ9UBM8 478 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 GIPP09681 153 aaPredicted RBP9.09□□□□□ -0.95
SS18-225ENST00000585121 SPP1P10451 314 aa9.09□□□□□ -0.95
SS18-225ENST00000585121 NKX2-1P43699 371 aaPredicted RBP9.09□□□□□ -0.95
SS18-225ENST00000585121 LYZP61626 148 aa9.09□□□□□ -0.95
SS18-225ENST00000585121 ZNF90Q03938 601 aa9.09□□□□□ -0.95
SS18-225ENST00000585121 PSMG4Q5JS54 123 aa9.09□□□□□ -0.95
SS18-225ENST00000585121 MORN3Q6PF18 240 aaPredicted RBP9.09□□□□□ -0.95
SS18-225ENST00000585121 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
SS18-225ENST00000585121 SEPSECSQ9HD40 501 aaKnown RBP9.09□□□□□ -0.95
SS18-225ENST00000585121 FBXL17Q9UF56 701 aa9.09□□□□□ -0.95
SS18-225ENST00000585121 IGKV1D-37A0A075B6S9 117 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 NUPR2A6NF83 97 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 ADAP1O75689 374 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 C1QBP02746 253 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 S100A7P31151 101 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 RAP2BP61225 183 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 OR2F1Q13607 317 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 ACTL10Q5JWF8 245 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 C1orf194Q5T5A4 169 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 THAP8Q8NA92 274 aa9.08□□□□□ -0.96
SS18-225ENST00000585121 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 BOLA2-SMG1P6H3BVE0 249 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 ID1P41134 155 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 NUTF2P61970 127 aaKnown RBP9.07□□□□□ -0.96
SS18-225ENST00000585121 POLR2GP62487 172 aaKnown RBP eCLIP9.07□□□□□ -0.96
SS18-225ENST00000585121 CYCSP99999 105 aaKnown RBP9.07□□□□□ -0.96
SS18-225ENST00000585121 ID3Q02535 119 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 AKR1C1Q04828 323 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 ZFP69Q49AA0 526 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 TRPT1Q86TN4 253 aaKnown RBP9.07□□□□□ -0.96
SS18-225ENST00000585121 BPIFCQ8NFQ6 507 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 RAB40CQ96S21 281 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 PSENENQ9NZ42 101 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 KLK5Q9Y337 293 aaPredicted RBP9.07□□□□□ -0.96
SS18-225ENST00000585121 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
SS18-225ENST00000585121 PLECQ15149 4684 aaKnown RBP9.06□□□□□ -0.96
SS18-225ENST00000585121 SMCO3A2RU48 225 aa9.06□□□□□ -0.96
SS18-225ENST00000585121 H3BP45 60 aa9.06□□□□□ -0.96
SS18-225ENST00000585121 GOSR2O14653 212 aa9.06□□□□□ -0.96
SS18-225ENST00000585121 H2BFSP57053 126 aa9.06□□□□□ -0.96
SS18-225ENST00000585121 IAH1Q2TAA2 248 aaPredicted RBP9.06□□□□□ -0.96
SS18-225ENST00000585121 HYLS1Q96M11 299 aa9.06□□□□□ -0.96
SS18-225ENST00000585121 MFFQ9GZY8 342 aa9.06□□□□□ -0.96
SS18-225ENST00000585121 SSSCA1O60232 199 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 SCGB1D2O95969 90 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 SAMD13Q5VXD3 122 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 CEMP1Q6PRD7 247 aaPredicted RBP9.05□□□□□ -0.96
SS18-225ENST00000585121 GSG1LQ6UXU4 331 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 OR8I2Q8N0Y5 310 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 OR4D5Q8NGN0 318 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 SMIM8Q96KF7 97 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 C11orf68Q9H3H3 251 aaKnown RBP9.05□□□□□ -0.96
SS18-225ENST00000585121 GSKIPQ9P0R6 139 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 PRSS46E5RG02 174 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 EWSR1Q01844 656 aaKnown RBP eCLIP9.05□□□□□ -0.96
SS18-225ENST00000585121 FGL1Q08830 312 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 ACOT7LQ6ZUV0 252 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 OR2T35Q8NGX2 323 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 LINC00052Q96N35 136 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 TMEM147Q9BVK8 224 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 NMES1Q9C002 83 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 SLC45A2Q9UMX9 530 aa9.05□□□□□ -0.96
SS18-225ENST00000585121 ALMS1Q8TCU4 4167 aa9.04□□□□□ -0.96
SS18-225ENST00000585121 IGKV1OR2-108A0A075B7D4 117 aa9.04□□□□□ -0.96
SS18-225ENST00000585121 SIX6O95475 246 aa9.04□□□□□ -0.96
SS18-225ENST00000585121 ORM2P19652 201 aa9.04□□□□□ -0.96
SS18-225ENST00000585121 GALR1P47211 349 aa9.04□□□□□ -0.96
SS18-225ENST00000585121 TMEM144Q7Z5S9 345 aa9.04□□□□□ -0.96
SS18-225ENST00000585121 S100A7AQ86SG5 101 aa9.04□□□□□ -0.96
SS18-225ENST00000585121 ZBTB8BQ8NAP8 495 aaPredicted RBP9.04□□□□□ -0.96
SS18-225ENST00000585121 C11orf45Q8TAV5 145 aa9.04□□□□□ -0.96
SS18-225ENST00000585121 C5orf51A6NDU8 294 aa9.03□□□□□ -0.96
SS18-225ENST00000585121 PSMB3P49720 205 aa9.03□□□□□ -0.96
SS18-225ENST00000585121 MEOX2P50222 304 aa9.03□□□□□ -0.96
SS18-225ENST00000585121 TAS2R30P59541 319 aa9.03□□□□□ -0.96
SS18-225ENST00000585121 OR10P1Q8NGE3 313 aa9.03□□□□□ -0.96
SS18-225ENST00000585121 OR1B1Q8NGR6 318 aa9.03□□□□□ -0.96
SS18-225ENST00000585121 PHLDA1Q8WV24 401 aaPredicted RBP9.03□□□□□ -0.96
SS18-225ENST00000585121 C2orf50Q96LR7 162 aa9.03□□□□□ -0.96
SS18-225ENST00000585121 GPR82Q96P67 336 aa9.03□□□□□ -0.96
SS18-225ENST00000585121 FAM25EA8MYX2 175 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 H3BMM0 161 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 L7N2F9 121 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 TSC22D2O75157 780 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 MIFP14174 115 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 SELENOTP62341 195 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 VAMP2P63027 116 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 DLK1P80370 383 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 CYP2G1PQ6ZSU1 146 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 SLC25A22Q9H936 323 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 NPVFQ9HCQ7 196 aa9.02□□□□□ -0.97
SS18-225ENST00000585121 ZNF98A6NK75 572 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 HMSDA8MTL9 139 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 FNDC10F2Z333 226 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 ISLRO14498 428 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 CCSO14618 274 aa9.01□□□□□ -0.97
SS18-225ENST00000585121 DEFB4AO15263 64 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms