RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 DEPPQ9NTK1 212 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 CLN8Q9UBY8 286 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 TRAPPC2LQ9UL33 140 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 RBM7Q9Y580 266 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 MYO7AQ13402 2215 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 CEP192Q8TEP8 1941 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 RP1P56715 2156 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 EML6Q6ZMW3 1958 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ZFHX2Q9C0A1 2572 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 TRBV20OR9-2A0A075B6H5 130 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 TRAV39A0A0B4J263 110 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 TRGV8A0A0C4DH27 118 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 MDFIC2A0A1B0GVS7 189 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 TMEM30CPA0ZSE6 113 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 PINLYPA6NC86 204 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 C17orf98A8MV24 154 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF705FA8MVS1 300 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 IQCF6A8MYZ5 107 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 C12orf77C9JDV5 145 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 RAMP3O60896 148 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 TRAPPC6AO75865 159 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ATP5LO75964 103 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 OR2J3O76001 311 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 MT-CO2P00403 227 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 MT-ND6P03923 174 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 OR5G3P0C626 314 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 OR9G9P0C7N8 305 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF705DP0CH99 300 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF705BP0CI00 300 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 CCL2P13500 99 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 CRISP2P16562 243 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 CCNOP22674 350 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 GDF1P27539 372 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 G6PCP35575 357 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 CTRLP40313 264 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 VDAC2P45880 294 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 RPL29P47914 159 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 CXCL12P48061 93 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ATP5G3P48201 142 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF90Q03938 601 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 TFF3Q07654 80 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 CLEC12BQ2HXU8 276 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 COL5A1-AS1Q5SY13 56 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 CYB5R2Q6BCY4 276 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 RASL11AQ6T310 242 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 TOMM20LQ6UXN7 152 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ADAMTSL5Q6ZMM2 481 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF705AQ6ZN79 300 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 WDR86Q86TI4 376 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 C1orf174Q8IYL3 243 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 MTURNQ8N3F0 131 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 C17orf78Q8N4C9 275 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 Q8N976 141 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 OR2M7Q8NG81 312 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 OR4B1Q8NGF8 309 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 CMTM2Q8TAZ6 248 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ABHD3Q8WU67 409 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 IL1F10Q8WWZ1 152 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF488Q96MN9 340 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 RNF2Q99496 336 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 OPN3Q9H1Y3 402 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 SLC25A22Q9H936 323 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 BOKQ9UMX3 212 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 ZFP30Q9Y2G7 519 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 XIRP2A4UGR9 3374 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 MYO7BQ6PIF6 2116 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 C5orf42Q9H799 3197 aa2.92□□□□□ -1.94
SMCHD1-208ENST00000583344 KMT2BQ9UMN6 2715 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 NCOR1O75376 2440 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 A0A0G2JMM0 328 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 TRBV7-9A0A0J9YWB2 115 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 A0A1W2PPB8 328 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 A0A1W2PRS3 328 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 SMIM27A0A1W2PRY6 76 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 C20orf202A1L168 122 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 KIR3DP1A8MWS1 328 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 C15orf65H3BRN8 121 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 SIRPB1O00241 398 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 ISLRO14498 428 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 HMGB3O15347 200 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 S1PR2O95136 353 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 HAND1O96004 215 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 HBZP02008 142 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 CRYGCP07315 174 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 LINC00869P0C866 280 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 CGB3P0DN86 165 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 CGB7P0DN87 165 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 IGLC2P0DOY2 106 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 IGLC3P0DOY3 106 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 CCL4P13236 92 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 GCHFRP30047 84 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 CFHR2P36980 270 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 NBL1P41271 181 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 KIR2DS2P43631 304 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 HSPE1P61604 102 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 RHOBP62745 196 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 TGFBR3Q03167 851 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF816Q0VGE8 651 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 KLRB1Q12918 225 aa2.91□□□□□ -1.94
SMCHD1-208ENST00000583344 POU2AF1Q16633 256 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms