RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 OR4X1Q8NH49 305 aa15.41■□□□□ 0.06
CCDC42-203ENST00000581598 ST8SIA2Q92186 375 aa15.41■□□□□ 0.06
CCDC42-203ENST00000581598 FNDC4Q9H6D8 234 aaPredicted RBP15.41■□□□□ 0.06
CCDC42-203ENST00000581598 HSPB11Q9Y547 144 aa15.41■□□□□ 0.06
CCDC42-203ENST00000581598 IGHV3OR16-13A0A075B7E8 117 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 IGHV3-74A0A0B4J1X5 117 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 NUPR2A6NF83 97 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 ARPC5O15511 151 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 SCGB2A1O75556 95 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 IFNA4P05014 189 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 TFPI2P48307 235 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 ACOT7LQ6ZUV0 252 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 STX12Q86Y82 276 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 TMEM217Q8N7C4 229 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 INO80EQ8NBZ0 244 aaPredicted RBP15.4■□□□□ 0.06
CCDC42-203ENST00000581598 CSTL1Q9H114 145 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 TMEM231Q9H6L2 316 aa15.4■□□□□ 0.06
CCDC42-203ENST00000581598 PAIP2BQ9ULR5 123 aaKnown RBP15.4■□□□□ 0.06
CCDC42-203ENST00000581598 DFFBO76075 338 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 CST7O76096 145 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 APOHP02749 345 aaPredicted RBP15.39■□□□□ 0.05
CCDC42-203ENST00000581598 NUP62P37198 522 aaPredicted RBP15.39■□□□□ 0.05
CCDC42-203ENST00000581598 OPRK1P41145 380 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 ZNF345Q14585 488 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 LILRB2Q8N423 598 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 OR10P1Q8NGE3 313 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 GATAD1Q8WUU5 269 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 PPP1R14BQ96C90 147 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 MFFQ9GZY8 342 aa15.39■□□□□ 0.05
CCDC42-203ENST00000581598 MRPL36Q9P0J6 103 aaKnown RBP15.39■□□□□ 0.05
CCDC42-203ENST00000581598 IGKV3-7A0A075B6H7 116 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 TRAV30A0A087WSZ9 112 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 A0A1W2PS18 150 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 NHLH2Q02577 135 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 OR2F1Q13607 317 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 ZNF124Q15973 351 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 OR8G2PQ6IF36 304 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 GBGT1Q8N5D6 347 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 MS4A6AQ9H2W1 248 aa15.38■□□□□ 0.05
CCDC42-203ENST00000581598 ALMS1Q8TCU4 4167 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 RPS10-NUDT3A0A1W2PQS6 291 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 CXorf65A6NEN9 183 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 CXCL2P19875 107 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 NPPCP23582 126 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 CRYBB3P26998 211 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 GPX4P36969 197 aaPredicted RBP15.37■□□□□ 0.05
CCDC42-203ENST00000581598 HBG1P69891 147 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 HBG2P69892 147 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 DLK1P80370 383 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 GGACTQ9BVM4 153 aa15.37■□□□□ 0.05
CCDC42-203ENST00000581598 FNDC10F2Z333 226 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 DNASE2O00115 360 aaPredicted RBP15.36■□□□□ 0.05
CCDC42-203ENST00000581598 S100A11P31949 105 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 EIF2B2P49770 351 aaKnown RBP15.36■□□□□ 0.05
CCDC42-203ENST00000581598 SLC38A11Q08AI6 406 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 PMS2P11Q13670 270 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 MLANAQ16655 118 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 ETFRF1Q6IPR1 90 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 CEMP1Q6PRD7 247 aaPredicted RBP15.36■□□□□ 0.05
CCDC42-203ENST00000581598 KCNRGQ8N5I3 272 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 LINC00476Q8WZB0 136 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 METTL26Q96S19 204 aa15.36■□□□□ 0.05
CCDC42-203ENST00000581598 BOLA2-SMG1P6H3BVE0 249 aa15.35■□□□□ 0.05
CCDC42-203ENST00000581598 IGKV1-17P01599 117 aa15.35■□□□□ 0.05
CCDC42-203ENST00000581598 ATP6V1FQ16864 119 aa15.35■□□□□ 0.05
CCDC42-203ENST00000581598 VWC2Q2TAL6 325 aa15.35■□□□□ 0.05
CCDC42-203ENST00000581598 LGALSLQ3ZCW2 172 aaPredicted RBP15.35■□□□□ 0.05
CCDC42-203ENST00000581598 C9orf62Q8N4C0 152 aa15.35■□□□□ 0.05
CCDC42-203ENST00000581598 OR1S2Q8NGQ3 325 aa15.35■□□□□ 0.05
CCDC42-203ENST00000581598 A0A0D9SG52 128 aa15.34■□□□□ 0.05
CCDC42-203ENST00000581598 OR5C1Q8NGR4 320 aa15.34■□□□□ 0.05
CCDC42-203ENST00000581598 FBXL17Q9UF56 701 aa15.34■□□□□ 0.05
CCDC42-203ENST00000581598 IGHV3-66A0A0C4DH42 116 aa15.33■□□□□ 0.04
CCDC42-203ENST00000581598 NKX2-5P52952 324 aaPredicted RBP15.33■□□□□ 0.04
CCDC42-203ENST00000581598 AP2S1P53680 142 aaPredicted RBP15.33■□□□□ 0.04
CCDC42-203ENST00000581598 DEFB131AP59861 70 aa15.33■□□□□ 0.04
CCDC42-203ENST00000581598 RPL11P62913 178 aaKnown RBP15.33■□□□□ 0.04
CCDC42-203ENST00000581598 GRAMD2BQ96HH9 432 aa15.33■□□□□ 0.04
CCDC42-203ENST00000581598 NARS2Q96I59 477 aaKnown RBP15.33■□□□□ 0.04
CCDC42-203ENST00000581598 RARRES2Q99969 163 aa15.33■□□□□ 0.04
CCDC42-203ENST00000581598 TMEM147Q9BVK8 224 aa15.33■□□□□ 0.04
CCDC42-203ENST00000581598 C11orf68Q9H3H3 251 aaKnown RBP15.33■□□□□ 0.04
CCDC42-203ENST00000581598 KLK5Q9Y337 293 aaPredicted RBP15.33■□□□□ 0.04
CCDC42-203ENST00000581598 U3KQE9 123 aa15.33■□□□□ 0.04
CCDC42-203ENST00000581598 K7EQG2 157 aa15.32■□□□□ 0.04
CCDC42-203ENST00000581598 IGLC1P0CG04 106 aa15.32■□□□□ 0.04
CCDC42-203ENST00000581598 YPEL3P61236 119 aaPredicted RBP15.32■□□□□ 0.04
CCDC42-203ENST00000581598 GAMTQ14353 236 aa15.32■□□□□ 0.04
CCDC42-203ENST00000581598 TIGITQ495A1 244 aa15.32■□□□□ 0.04
CCDC42-203ENST00000581598 SLC35E1Q96K37 410 aa15.32■□□□□ 0.04
CCDC42-203ENST00000581598 ATP5SQ99766 215 aa15.32■□□□□ 0.04
CCDC42-203ENST00000581598 WFDC1Q9HC57 220 aa15.32■□□□□ 0.04
CCDC42-203ENST00000581598 TAAR5O14804 337 aa15.31■□□□□ 0.04
CCDC42-203ENST00000581598 HNRNPCP07910 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCDC42-203ENST00000581598 CLINT1Q14677 625 aa15.31■□□□□ 0.04
CCDC42-203ENST00000581598 TMUB2Q71RG4 321 aa15.31■□□□□ 0.04
CCDC42-203ENST00000581598 FAM24BQ8N5W8 94 aa15.31■□□□□ 0.04
CCDC42-203ENST00000581598 SMIM3Q9BZL3 60 aa15.31■□□□□ 0.04
CCDC42-203ENST00000581598 UQCC1Q9NVA1 299 aa15.31■□□□□ 0.04
CCDC42-203ENST00000581598 RABAC1Q9UI14 185 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms