RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RPS19BP1Q86WX3 136 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 LRRC25Q8N386 305 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 ANKRD29Q8N6D5 301 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 ZNF439Q8NDP4 499 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 C11orf40Q8WZ69 217 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 COMMD5Q9GZQ3 224 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 PRO3102Q9H379 93 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 PRTFDC1Q9NRG1 225 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 LHFPL6Q9Y693 200 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 TRPM7Q96QT4 1865 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 MUC3AQ02505 3323 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 PSME4Q14997 1843 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 CLDN24A6NM45 220 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 TMEM212A6NML5 194 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 CYBAP13498 195 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 OMPP47874 163 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 CEBPGP53567 150 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 LSM6P62312 80 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 AESQ08117 197 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 CDK5R1Q15078 307 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 SPOPLQ6IQ16 392 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 BPIFA4PQ86YQ2 179 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 TRAPPC5Q8IUR0 188 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 CLDN22Q8N7P3 220 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 WFDC11Q8NEX6 87 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 RASSF5Q8WWW0 418 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 DCUN1D1Q96GG9 259 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 ADAT1Q9BUB4 502 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 OR51V1Q9H2C8 321 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 C11orf68Q9H3H3 251 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 BOLA2Q9H3K6 86 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 CEP290O15078 2479 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 COL6A3P12111 3177 aa1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 DDX60LQ5H9U9 1706 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-205ENST00000581383 VCANP13611 3396 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 FBN3Q75N90 2809 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 DOCK2Q92608 1830 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 LOC285556D6RIA3 1793 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 CDH23Q9H251 3354 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 DPRXA6NFQ7 191 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 TMEM114B3SHH9 223 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 RPP14O95059 124 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 ANGP03950 147 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 TCRBP04435 133 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 RPS20P60866 119 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 RANP62826 216 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 RUNX1Q01196 453 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 SPANXN3Q5MJ09 141 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 FKBP1CQ5VVH2 108 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 LCN15Q6UWW0 184 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 AAED1Q7RTV5 226 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 TMEM106AQ96A25 262 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 SCGB3A1Q96QR1 104 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 ULBP3Q9BZM4 244 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 YIPF3Q9GZM5 350 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 CYSTM1Q9H1C7 97 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 EYSQ5T1H1 3165 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 PIEZO1Q92508 2521 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 DOCK1Q14185 1865 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 UNC80Q8N2C7 3258 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 RP1P56715 2156 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 PHIPQ8WWQ0 1821 aa1.45□□□□□ -2.18
SMCHD1-205ENST00000581383 RBBP6Q7Z6E9 1792 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 IGKV3D-7A0A0C4DH55 119 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 IGKV3OR2-268A0A0C4DH90 116 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 EXOC1LA0A1B0GW35 172 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 OR4C46A6NHA9 309 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 GOLGA6L19H0YKK7 550 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 CLPSP04118 112 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 MRPS15P82914 257 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 FADDQ13158 208 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 STX5Q13190 355 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 SURF2Q15527 256 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 LPCAT3Q6P1A2 487 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 DEFB128Q7Z7B8 93 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 CLVS1Q8IUQ0 354 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 OR13C4Q8NGS5 318 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 DNAJC9Q8WXX5 260 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 NIPSNAP1Q9BPW8 284 aa1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 MRPL27Q9P0M9 148 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-205ENST00000581383 COL6A6A6NMZ7 2263 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 A0A0G2JMZ2 1700 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 A0A0D9SFI3 127 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 PQLC2LA1A4F0 135 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 MRPS14O60783 128 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 CRYZL1O95825 349 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 SHBGP04278 402 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 IL9P15248 144 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 CTAG1AP78358 180 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 C15orf53Q8NAA6 179 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 C10orf105Q8TEF2 133 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 TSPAN32Q96QS1 320 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 GINS4Q9BRT9 223 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 TMEM147Q9BVK8 224 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 CKLFQ9UBR5 152 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 TMEM56-RWDD3S4R434 201 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 LAMB1P07942 1786 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 ROBO3Q96MS0 1386 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 PKD1L2Q7Z442 2459 aa1.43□□□□□ -2.18
SMCHD1-205ENST00000581383 LRRC37A2A6NM11 1700 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms