RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 OR2G3Q8NGZ4 309 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 PPP1R14BQ96C90 147 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 GNPNAT1Q96EK6 184 aaPredicted RBP7.91□□□□□ -1.14
CCDC47-203ENST00000580986 METTL26Q96S19 204 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 PFDN5Q99471 154 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 SMIM3Q9BZL3 60 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 ARL6Q9H0F7 186 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 ARV1Q9H2C2 271 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 TMEM231Q9H6L2 316 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 VSIRQ9H7M9 311 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 TECRQ9NZ01 308 aaKnown RBP7.91□□□□□ -1.14
CCDC47-203ENST00000580986 U3KQE9 123 aa7.91□□□□□ -1.14
CCDC47-203ENST00000580986 IGHV3-35A0A0C4DH35 117 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 IGHV7-4-1A0A0J9YVY3 117 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 KANTRA0A1W2PQU2 76 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 ZNF320A2RRD8 509 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 YIF1AO95070 293 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 CSN3P07498 182 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 HNRNPCP07910 306 aaKnown RBP eCLIP7.9□□□□□ -1.14
CCDC47-203ENST00000580986 CBLN1P23435 193 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 NPPCP23582 126 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 B2MP61769 119 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 SERF2P84101 59 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 USF2Q15853 346 aaPredicted RBP7.9□□□□□ -1.14
CCDC47-203ENST00000580986 C1orf194Q5T5A4 169 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 C9orf62Q8N4C0 152 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 STPG3Q8N7X2 389 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 OR1L4Q8NGR5 311 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 STOML3Q8TAV4 291 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 GATAD1Q8WUU5 269 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 NARS2Q96I59 477 aaKnown RBP7.9□□□□□ -1.14
CCDC47-203ENST00000580986 CYTL1Q9NRR1 136 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 SLC39A9Q9NUM3 307 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 SMPXQ9UHP9 88 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 RABAC1Q9UI14 185 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 PXMP4Q9Y6I8 212 aa7.9□□□□□ -1.14
CCDC47-203ENST00000580986 WNK1Q9H4A3 2382 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 HYPMO75409 117 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 IGLV1-51P01701 117 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 FOLR2P14207 255 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 LYZP61626 148 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 TM4SF20Q53R12 229 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 RPL7L1Q6DKI1 246 aaKnown RBP7.89□□□□□ -1.15
CCDC47-203ENST00000580986 TMEM182Q6ZP80 229 aaPredicted RBP7.89□□□□□ -1.15
CCDC47-203ENST00000580986 TMUB2Q71RG4 321 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 RNF2Q99496 336 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 C20orf24Q9BUV8 137 aa7.89□□□□□ -1.15
CCDC47-203ENST00000580986 TRAV25A0A0B4J276 109 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 SEC14L6B5MCN3 397 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 H3BRN7 92 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 BUB3O43684 328 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 MBP02144 154 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 SPP1P10451 314 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 GATA2P23769 480 aaPredicted RBP7.88□□□□□ -1.15
CCDC47-203ENST00000580986 ATP6V0CP27449 155 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 MIC13Q5XKP0 118 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 LAMTOR1Q6IAA8 161 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 ADAMTSL5Q6ZMM2 481 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 GRAMD2BQ96HH9 432 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 GPR82Q96P67 336 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 RSG1Q9BU20 258 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 DNAJC4Q9NNZ3 241 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 ZMAT5Q9UDW3 170 aaKnown RBP7.88□□□□□ -1.15
CCDC47-203ENST00000580986 HIGD1AQ9Y241 93 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 DNHD1Q96M86 4753 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 PKD1L1Q8TDX9 2849 aa7.88□□□□□ -1.15
CCDC47-203ENST00000580986 CHEK1O14757 476 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 COX7A2P2O60397 106 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 OR5G3P0C626 314 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 SEC11BP0C7V7 166 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 TPT1P13693 172 aaKnown RBP7.87□□□□□ -1.15
CCDC47-203ENST00000580986 ORM2P19652 201 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 C16orf54Q6UWD8 224 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 PATE2Q6UY27 113 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 SLC51BQ86UW2 128 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 OR1B1Q8NGR6 318 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 TMEM37Q8WXS4 190 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 SHANK2-AS3Q9BTD1 123 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 PBDC1Q9BVG4 233 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 RHPN1-AS1Q9BWJ2 59 aa7.87□□□□□ -1.15
CCDC47-203ENST00000580986 ZNF471Q9BX82 626 aaPredicted RBP7.87□□□□□ -1.15
CCDC47-203ENST00000580986 MRPL32Q9BYC8 188 aaKnown RBP7.87□□□□□ -1.15
CCDC47-203ENST00000580986 SLC25A39Q9BZJ4 359 aaPredicted RBP7.87□□□□□ -1.15
CCDC47-203ENST00000580986 TRAV2A0A0B4J234 112 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 HELTA6NFD8 242 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 ZNF98A6NK75 572 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 SAP30O75446 220 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 M6PRP20645 277 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 EGFEM1PQ0D2K5 195 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 DEFB114Q30KQ6 69 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 ACOT6Q3I5F7 207 aaPredicted RBP7.86□□□□□ -1.15
CCDC47-203ENST00000580986 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 C10orf113Q5VZT2 155 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 FAM90A2PQ658T7 463 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 EIF5AL1Q6IS14 154 aaKnown RBP7.86□□□□□ -1.15
CCDC47-203ENST00000580986 LCN12Q6JVE5 192 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 BAP18Q8IXM2 172 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 HSD17B11Q8NBQ5 300 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 DYNLRB2Q8TF09 96 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 GLMPQ8WWB7 406 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms