RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 FXYD5Q96DB9 178 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 VSTM5A8MXK1 200 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 SRIP30626 198 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 CAMPP49913 170 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 KRTDAPP60985 99 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 TMEM30BQ3MIR4 351 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 TMEM136Q6ZRR5 245 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 ONECUT1Q9UBC0 465 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 PAM16Q9Y3D7 125 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 HILPDAQ9Y5L2 63 aa8.39□□□□□ -1.07
TOP3A-209ENST00000580095 PGPA6NDG6 321 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 PEX7O00628 323 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 FSTL3O95633 263 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
TOP3A-209ENST00000580095 CD3EP07766 207 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 RPL27AP46776 148 aaKnown RBP8.38□□□□□ -1.07
TOP3A-209ENST00000580095 SUB1P53999 127 aaKnown RBP eCLIP8.38□□□□□ -1.07
TOP3A-209ENST00000580095 SLAQ13239 276 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 PLGLAQ15195 96 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 ZNF835Q9Y2P0 537 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 LOC102724200A0A096LPH7 203 aaPredicted RBP8.38□□□□□ -1.07
TOP3A-209ENST00000580095 TRAV8-1A0A0A6YYK1 113 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 FBLN7Q53RD9 439 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 KLF17Q5JT82 389 aaPredicted RBP8.38□□□□□ -1.07
TOP3A-209ENST00000580095 MUC15Q8N387 334 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 PNKDQ8N490 385 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 CST9LQ9H4G1 147 aa8.38□□□□□ -1.07
TOP3A-209ENST00000580095 IGHV1-3A0A0C4DH29 117 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 IGHV2-70DA0A0C4DH43 119 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 ZNF253O75346 499 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 TPPP2P59282 170 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 C20orf144Q9BQM9 153 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 OSTCQ9NRP0 149 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 CDC42EP3Q9UKI2 254 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 SIGLEC9Q9Y336 463 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 LY96Q9Y6Y9 160 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 ZFHX3Q15911 3703 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 PPIAL4CA0A0B4J2A2 164 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 BMPR1BO00238 502 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 PPIAL4GP0DN37 164 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 NTF3P20783 257 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 RIPPLY3P57055 190 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 LYZP61626 148 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 ARF6P62330 175 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 GDF5OSQ5U4N7 250 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 LINC00322Q6ZN03 302 aaPredicted RBP8.37□□□□□ -1.07
TOP3A-209ENST00000580095 C19orf24Q9BVV8 132 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 MRPL32Q9BYC8 188 aaKnown RBP8.37□□□□□ -1.07
TOP3A-209ENST00000580095 NGBQ9NPG2 151 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 FBXL7Q9UJT9 491 aa8.37□□□□□ -1.07
TOP3A-209ENST00000580095 BUB1B-PAK6H3BSN5 160 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 MC5RP33032 325 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 KLRD1Q13241 179 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 LINC00311Q8N616 119 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 OR1L4Q8NGR5 311 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 RPEQ96AT9 228 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 SMIM12Q96EX1 92 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 GNB1LQ9BYB4 327 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 VPS13CQ709C8 3753 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 VWC2LB2RUY7 222 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 IGLV1-47P01700 117 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 RBP4P02753 201 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 AMTP48728 403 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 TCF24Q7RTU0 167 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 PPP1R27Q86WC6 154 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 OR4C5Q8NGB2 326 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 KAAG1Q9UBP8 84 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 TBL2Q9Y4P3 447 aaKnown RBP8.36□□□□□ -1.07
TOP3A-209ENST00000580095 CNIH1O95406 144 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 ATP5IP56385 69 aaPredicted RBP8.36□□□□□ -1.07
TOP3A-209ENST00000580095 ODF1Q14990 250 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 MMDQ15546 238 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 TPTE2P1Q5T6R2 138 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 ATOH7Q8N100 152 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 SIGLECL1Q8N7X8 197 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 OR2D3Q8NGH3 330 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 OR4A5Q8NH83 315 aa8.36□□□□□ -1.07
TOP3A-209ENST00000580095 SMIM27A0A1W2PRY6 76 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 TIMM23O14925 209 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 LGALS7P47929 136 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 COMPP49747 757 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-209ENST00000580095 UBE2G1P62253 170 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 EXOC3-AS1Q8N2X6 119 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 THAP8Q8NA92 274 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 NUP35Q8NFH5 326 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 ZNF596Q8TC21 504 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 CLEC7AQ9BXN2 247 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 HIGD1CA8MV81 97 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 B9A039 149 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 TEX22C9J3V5 150 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 K7ENP7 123 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 CCL21O00585 134 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 APCSP02743 223 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 AMY1AP04745 511 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 PSG1P11464 419 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 ZNF137PP52743 207 aa8.35□□□□□ -1.07
TOP3A-209ENST00000580095 ZNF672Q499Z4 452 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-209ENST00000580095 BCL6BQ8N143 479 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-209ENST00000580095 SRSF12Q8WXF0 261 aaKnown RBP8.35□□□□□ -1.07
TOP3A-209ENST00000580095 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms