RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 EIF2B2P49770 351 aaKnown RBP9.79□□□□□ -0.84
TRAF4-214ENST00000580073 RAB11AP62491 216 aa9.79□□□□□ -0.84
TRAF4-214ENST00000580073 RPL11P62913 178 aaKnown RBP9.79□□□□□ -0.84
TRAF4-214ENST00000580073 LRRC37A5PQ49AS3 106 aa9.79□□□□□ -0.84
TRAF4-214ENST00000580073 Q5BKY6 102 aa9.79□□□□□ -0.84
TRAF4-214ENST00000580073 FAM90A2PQ658T7 463 aa9.79□□□□□ -0.84
TRAF4-214ENST00000580073 OR8G2PQ6IF36 304 aa9.79□□□□□ -0.84
TRAF4-214ENST00000580073 MORN3Q6PF18 240 aaPredicted RBP9.79□□□□□ -0.84
TRAF4-214ENST00000580073 ZNF600Q6ZNG1 722 aa9.79□□□□□ -0.84
TRAF4-214ENST00000580073 PPP1R1CQ8WVI7 109 aa9.79□□□□□ -0.84
TRAF4-214ENST00000580073 IGHV3-49A0A0A0MS15 119 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 APOHP02749 345 aaPredicted RBP9.78□□□□□ -0.84
TRAF4-214ENST00000580073 MIFP14174 115 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 OR10J1P30954 320 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 RPP30P78346 268 aaKnown RBP9.78□□□□□ -0.84
TRAF4-214ENST00000580073 ZNF90Q03938 601 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 ETFRF1Q6IPR1 90 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 TMEM182Q6ZP80 229 aaPredicted RBP9.78□□□□□ -0.84
TRAF4-214ENST00000580073 ACOT7LQ6ZUV0 252 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 LILRB2Q8N423 598 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 GBGT1Q8N5D6 347 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 CHAC2Q8WUX2 184 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 GRAMD2BQ96HH9 432 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 MED28Q9H204 178 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 MS4A6AQ9H2W1 248 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 VSIRQ9H7M9 311 aa9.78□□□□□ -0.84
TRAF4-214ENST00000580073 PUS1Q9Y606 427 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRAF4-214ENST00000580073 L7N2F9 121 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 CST7O76096 145 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 MPC2O95563 127 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 DEFB131AP59861 70 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 RRAS2P62070 204 aaPredicted RBP9.77□□□□□ -0.85
TRAF4-214ENST00000580073 VAMP2P63027 116 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 ZNF124Q15973 351 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 TMEM252Q8N6L7 170 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 OR1S2Q8NGQ3 325 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 ST8SIA2Q92186 375 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 METTL26Q96S19 204 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 LYRM2Q9NU23 88 aaPredicted RBP9.77□□□□□ -0.85
TRAF4-214ENST00000580073 RABAC1Q9UI14 185 aa9.77□□□□□ -0.85
TRAF4-214ENST00000580073 IGHV3OR16-13A0A075B7E8 117 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 TRAV30A0A087WSZ9 112 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 IGHV3-74A0A0B4J1X5 117 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 IGLL5B9A064 214 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 NPPCP23582 126 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 BCAP31P51572 246 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 CAV2P51636 162 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 YPEL3P61236 119 aaPredicted RBP9.76□□□□□ -0.85
TRAF4-214ENST00000580073 DLK1P80370 383 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 CYCSP99999 105 aaKnown RBP9.76□□□□□ -0.85
TRAF4-214ENST00000580073 NHLH2Q02577 135 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 SLC35E1Q96K37 410 aa9.76□□□□□ -0.85
TRAF4-214ENST00000580073 AGRNO00468 2067 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 TRAV10A0A0B4J240 114 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 G3V3Q6 166 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 TOMM40O96008 361 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 PSG1P11464 419 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 GATA2P23769 480 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-214ENST00000580073 USF2Q15853 346 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-214ENST00000580073 LEMD1Q68G75 181 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 LINC00336Q6ZUF6 198 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 STXBP6Q8NFX7 210 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 TRGV9Q99603 122 aa9.75□□□□□ -0.85
TRAF4-214ENST00000580073 P2RY1P47900 373 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 SULT1A1P50225 295 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 SLC38A11Q08AI6 406 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 OR2F1Q13607 317 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 Q6ZNX1 250 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 TMEM144Q7Z5S9 345 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 Q8NAQ8 132 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 OR10P1Q8NGE3 313 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 C1QTNF4Q9BXJ3 329 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 MBD2Q9UBB5 411 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 U3KQE9 123 aa9.74□□□□□ -0.85
TRAF4-214ENST00000580073 IGHV3-66A0A0C4DH42 116 aa9.73□□□□□ -0.85
TRAF4-214ENST00000580073 SMCO3A2RU48 225 aa9.73□□□□□ -0.85
TRAF4-214ENST00000580073 HELTA6NFD8 242 aa9.73□□□□□ -0.85
TRAF4-214ENST00000580073 ZFP92A6NM28 416 aa9.73□□□□□ -0.85
TRAF4-214ENST00000580073 E5RGE8 158 aa9.73□□□□□ -0.85
TRAF4-214ENST00000580073 DEFB4AO15263 64 aa9.73□□□□□ -0.85
TRAF4-214ENST00000580073 RD3LP0DJH9 198 aa9.73□□□□□ -0.85
TRAF4-214ENST00000580073 PVALBP20472 110 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-214ENST00000580073 NUTF2P61970 127 aaKnown RBP9.73□□□□□ -0.85
TRAF4-214ENST00000580073 TRPT1Q86TN4 253 aaKnown RBP9.73□□□□□ -0.85
TRAF4-214ENST00000580073 OR51G1Q8NGK1 321 aa9.73□□□□□ -0.85
TRAF4-214ENST00000580073 IGHV4-28A0A0C4DH34 117 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 FNDC10F2Z333 226 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 K7EQG2 157 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 RLN2P04090 185 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 IL4P05112 153 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 GIPP09681 153 aaPredicted RBP9.72□□□□□ -0.85
TRAF4-214ENST00000580073 CRYBB3P26998 211 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 AP2S1P53680 142 aaPredicted RBP9.72□□□□□ -0.85
TRAF4-214ENST00000580073 AKR1C1Q04828 323 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 VWC2Q2TAL6 325 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 Q8WTZ3 238 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 NPVFQ9HCQ7 196 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 APLNQ9ULZ1 77 aa9.72□□□□□ -0.85
TRAF4-214ENST00000580073 DNAH6Q9C0G6 4158 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms