RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 C11orf1Q9H5F2 150 aa17.68■□□□□ 0.42
LIMD2-207ENST00000579329 NPVFQ9HCQ7 196 aa17.68■□□□□ 0.42
LIMD2-207ENST00000579329 NRN1Q9NPD7 142 aa17.68■□□□□ 0.42
LIMD2-207ENST00000579329 FBXL17Q9UF56 701 aa17.68■□□□□ 0.42
LIMD2-207ENST00000579329 SLC45A2Q9UMX9 530 aa17.68■□□□□ 0.42
LIMD2-207ENST00000579329 SACSQ9NZJ4 4579 aa17.68■□□□□ 0.42
LIMD2-207ENST00000579329 GOSR2O14653 212 aa17.67■□□□□ 0.42
LIMD2-207ENST00000579329 ZNF688P0C7X2 276 aa17.67■□□□□ 0.42
LIMD2-207ENST00000579329 GATA2P23769 480 aaPredicted RBP17.67■□□□□ 0.42
LIMD2-207ENST00000579329 CAV2P51636 162 aa17.67■□□□□ 0.42
LIMD2-207ENST00000579329 RAB32Q13637 225 aa17.67■□□□□ 0.42
LIMD2-207ENST00000579329 LEMD1Q68G75 181 aa17.67■□□□□ 0.42
LIMD2-207ENST00000579329 EDA2RQ9HAV5 297 aa17.67■□□□□ 0.42
LIMD2-207ENST00000579329 ARL16Q0P5N6 197 aa17.66■□□□□ 0.42
LIMD2-207ENST00000579329 TMEM182Q6ZP80 229 aaPredicted RBP17.66■□□□□ 0.42
LIMD2-207ENST00000579329 Q6ZWC4 215 aa17.66■□□□□ 0.42
LIMD2-207ENST00000579329 EPPK1P58107 5090 aaKnown RBP17.66■□□□□ 0.42
LIMD2-207ENST00000579329 DEDDO75618 318 aa17.65■□□□□ 0.42
LIMD2-207ENST00000579329 ORM2P19652 201 aa17.65■□□□□ 0.42
LIMD2-207ENST00000579329 S100A7P31151 101 aa17.65■□□□□ 0.42
LIMD2-207ENST00000579329 SELENOTP62341 195 aa17.65■□□□□ 0.42
LIMD2-207ENST00000579329 TEPPQ6URK8 271 aa17.65■□□□□ 0.42
LIMD2-207ENST00000579329 MUC7Q8TAX7 377 aa17.65■□□□□ 0.42
LIMD2-207ENST00000579329 TMEM147Q9BVK8 224 aa17.65■□□□□ 0.42
LIMD2-207ENST00000579329 FAM24AA6NFZ4 105 aa17.64■□□□□ 0.41
LIMD2-207ENST00000579329 C3orf84H3BNL1 204 aa17.64■□□□□ 0.41
LIMD2-207ENST00000579329 OR1B1Q8NGR6 318 aa17.64■□□□□ 0.41
LIMD2-207ENST00000579329 OVOL2Q9BRP0 275 aa17.64■□□□□ 0.41
LIMD2-207ENST00000579329 SEPSECSQ9HD40 501 aaKnown RBP17.64■□□□□ 0.41
LIMD2-207ENST00000579329 TP53TG1Q9Y2A0 90 aa17.64■□□□□ 0.41
LIMD2-207ENST00000579329 TENM2Q9NT68 2774 aa17.63■□□□□ 0.41
LIMD2-207ENST00000579329 SIX6O95475 246 aa17.63■□□□□ 0.41
LIMD2-207ENST00000579329 SNRPD3P62318 126 aaKnown RBP17.63■□□□□ 0.41
LIMD2-207ENST00000579329 SLC38A11Q08AI6 406 aa17.63■□□□□ 0.41
LIMD2-207ENST00000579329 OR8I2Q8N0Y5 310 aa17.63■□□□□ 0.41
LIMD2-207ENST00000579329 CSTL1Q9H114 145 aa17.63■□□□□ 0.41
LIMD2-207ENST00000579329 LYRM2Q9NU23 88 aaPredicted RBP17.63■□□□□ 0.41
LIMD2-207ENST00000579329 CST7O76096 145 aa17.62■□□□□ 0.41
LIMD2-207ENST00000579329 LINC00869P0C866 280 aa17.62■□□□□ 0.41
LIMD2-207ENST00000579329 DEFB135Q30KP9 77 aa17.62■□□□□ 0.41
LIMD2-207ENST00000579329 PSMG4Q5JS54 123 aa17.62■□□□□ 0.41
LIMD2-207ENST00000579329 STHQ8IWL8 128 aa17.62■□□□□ 0.41
LIMD2-207ENST00000579329 NMES1Q9C002 83 aa17.62■□□□□ 0.41
LIMD2-207ENST00000579329 SPRY2O43597 315 aa17.61■□□□□ 0.41
LIMD2-207ENST00000579329 SSNA1O43805 119 aa17.61■□□□□ 0.41
LIMD2-207ENST00000579329 PLP1P60201 277 aa17.61■□□□□ 0.41
LIMD2-207ENST00000579329 RAP2BP61225 183 aa17.61■□□□□ 0.41
LIMD2-207ENST00000579329 CYCSP99999 105 aaKnown RBP17.61■□□□□ 0.41
LIMD2-207ENST00000579329 STX12Q86Y82 276 aa17.61■□□□□ 0.41
LIMD2-207ENST00000579329 DOK5Q9P104 306 aa17.61■□□□□ 0.41
LIMD2-207ENST00000579329 BIRC6Q9NR09 4857 aa17.61■□□□□ 0.41
LIMD2-207ENST00000579329 ZNF98A6NK75 572 aa17.6■□□□□ 0.41
LIMD2-207ENST00000579329 SULT1A1P50225 295 aa17.6■□□□□ 0.41
LIMD2-207ENST00000579329 ZNF546Q86UE3 836 aa17.6■□□□□ 0.41
LIMD2-207ENST00000579329 TMEM252Q8N6L7 170 aa17.6■□□□□ 0.41
LIMD2-207ENST00000579329 TMEM217Q8N7C4 229 aa17.6■□□□□ 0.41
LIMD2-207ENST00000579329 SLC25A22Q9H936 323 aa17.6■□□□□ 0.41
LIMD2-207ENST00000579329 HIGD1AQ9Y241 93 aa17.6■□□□□ 0.41
LIMD2-207ENST00000579329 IGSF23A1L1A6 192 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 KNCNA6PVL3 124 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 HYPMO75409 117 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 PTTG1O95997 202 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 RLN2P04090 185 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 GALR1P47211 349 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 S100A7AQ86SG5 101 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 RNF183Q96D59 192 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 GPR82Q96P67 336 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 SLC25A32Q9H2D1 315 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 UQCC1Q9NVA1 299 aa17.59■□□□□ 0.41
LIMD2-207ENST00000579329 H3BRN7 92 aa17.58■□□□□ 0.4
LIMD2-207ENST00000579329 AGPAT2O15120 278 aa17.58■□□□□ 0.4
LIMD2-207ENST00000579329 S100A11P31949 105 aa17.58■□□□□ 0.4
LIMD2-207ENST00000579329 ID1P41134 155 aa17.58■□□□□ 0.4
LIMD2-207ENST00000579329 HBG1P69891 147 aa17.58■□□□□ 0.4
LIMD2-207ENST00000579329 HBG2P69892 147 aa17.58■□□□□ 0.4
LIMD2-207ENST00000579329 SAMD13Q5VXD3 122 aa17.58■□□□□ 0.4
LIMD2-207ENST00000579329 TRPT1Q86TN4 253 aaKnown RBP17.58■□□□□ 0.4
LIMD2-207ENST00000579329 OR5G3P0C626 314 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 LYL1P12980 280 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 MEOX2P50222 304 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 LRRC37A5PQ49AS3 106 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 ACTL10Q5JWF8 245 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 PXDC1Q5TGL8 231 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 MGST2Q99735 147 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 SHANK2-AS3Q9BTD1 123 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 SCRT1Q9BWW7 348 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 SLC25A39Q9BZJ4 359 aaPredicted RBP17.57■□□□□ 0.4
LIMD2-207ENST00000579329 DNAH1Q9P2D7 4330 aa17.57■□□□□ 0.4
LIMD2-207ENST00000579329 E5RGE8 158 aa17.56■□□□□ 0.4
LIMD2-207ENST00000579329 SOCS3O14543 225 aa17.56■□□□□ 0.4
LIMD2-207ENST00000579329 CA1P00915 261 aaPredicted RBP17.56■□□□□ 0.4
LIMD2-207ENST00000579329 PSMB3P49720 205 aa17.56■□□□□ 0.4
LIMD2-207ENST00000579329 H2BFSP57053 126 aa17.56■□□□□ 0.4
LIMD2-207ENST00000579329 RAB31Q13636 194 aa17.56■□□□□ 0.4
LIMD2-207ENST00000579329 VWC2Q2TAL6 325 aa17.56■□□□□ 0.4
LIMD2-207ENST00000579329 LYSTQ99698 3801 aa17.56■□□□□ 0.4
LIMD2-207ENST00000579329 ARL6Q9H0F7 186 aa17.56■□□□□ 0.4
LIMD2-207ENST00000579329 ATP6V1FQ16864 119 aa17.55■□□□□ 0.4
LIMD2-207ENST00000579329 MORN3Q6PF18 240 aaPredicted RBP17.55■□□□□ 0.4
LIMD2-207ENST00000579329 GATAD1Q8WUU5 269 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms