RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 COQ8AQ8NI60 647 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 C17orf77Q96MU5 243 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 SOSTQ9BQB4 213 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 SLC25A22Q9H936 323 aa6.37□□□□□ -1.39
GGA3-207ENST00000578896 SEPSECSQ9HD40 501 aaKnown RBP6.37□□□□□ -1.39
GGA3-207ENST00000578896 FABP12A6NFH5 140 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 PRSS29PA6NIE9 313 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 SNRPGP15A8MWD9 76 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 PITX3O75364 302 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 SPART-AS1P0CW21 52 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 GPX4P36969 197 aaPredicted RBP6.36□□□□□ -1.39
GGA3-207ENST00000578896 ID1P41134 155 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 OR8G2PQ6IF36 304 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 SCGB3A2Q96PL1 93 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 NEU1Q99519 415 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 C7orf50Q9BRJ6 194 aaKnown RBP6.36□□□□□ -1.39
GGA3-207ENST00000578896 RSG1Q9BU20 258 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 SLIRPQ9GZT3 109 aaKnown RBP6.36□□□□□ -1.39
GGA3-207ENST00000578896 SLC25A32Q9H2D1 315 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 CCDC59Q9P031 241 aaKnown RBP6.36□□□□□ -1.39
GGA3-207ENST00000578896 DKK2Q9UBU2 259 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 HSPG2P98160 4391 aa6.36□□□□□ -1.39
GGA3-207ENST00000578896 A0A0J9YX75 114 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 LOC102723971A0A1B0GUV8 181 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 H3BP45 60 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 WRBO00258 174 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 HOXB5P09067 269 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 P0DMU3 169 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 FAM231AP0DMU4 169 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 FAM231CP0DMU5 169 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 ANXA3P12429 323 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 ORM2P19652 201 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 VAMP1P23763 118 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 PSMB3P49720 205 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 PSG9Q00887 426 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 ZNF79Q15937 498 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 EBLN2Q6P2I7 272 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 LINC00336Q6ZUF6 198 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 UBE2DNLQ8IWF7 75 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 RAB2BQ8WUD1 216 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 C16orf92Q96LL3 132 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 TRGV9Q99603 122 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 NIPSNAP3BQ9BS92 247 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 RSL24D1Q9UHA3 163 aaKnown RBP6.35□□□□□ -1.39
GGA3-207ENST00000578896 YTHDF2Q9Y5A9 579 aaKnown RBP6.35□□□□□ -1.39
GGA3-207ENST00000578896 RFNGQ9Y644 331 aa6.35□□□□□ -1.39
GGA3-207ENST00000578896 SMIM9A6NGZ8 99 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 ZNF705GA8MUZ8 300 aaPredicted RBP6.34□□□□□ -1.39
GGA3-207ENST00000578896 H3BMQ9 156 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 NUP62P37198 522 aaPredicted RBP6.34□□□□□ -1.39
GGA3-207ENST00000578896 TMBIM6P55061 237 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 RAB11AP62491 216 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 FGL1Q08830 312 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 PPP1R1AQ13522 171 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 PYDC2Q56P42 97 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 SPANXN5Q5MJ07 72 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 C1orf194Q5T5A4 169 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 RNF182Q8N6D2 247 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 THAP8Q8NA92 274 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 MCFD2Q8NI22 146 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 DOK5Q9P104 306 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 PFDN2Q9UHV9 154 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 GOLT1BQ9Y3E0 138 aa6.34□□□□□ -1.39
GGA3-207ENST00000578896 TRAV8-2A0A0B4J237 113 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 TMEM189A5PLL7 270 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 ZNF98A6NK75 572 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 PRSS46E5RG02 174 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 M0R2Z0 102 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 ISLRO14498 428 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 SFT2D2O95562 160 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 IFNA21P01568 189 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 HBE1P02100 147 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 FABP1P07148 127 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 PAX9P55771 341 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 SRPXP78539 464 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 FCN2Q15485 313 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 SPINK13Q1W4C9 94 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 TMEM128Q5BJH2 165 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 GGNBP1Q5YKI7 109 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 TMEM88Q6PEY1 159 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 AMTNQ6UX39 209 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 TOMM5Q8N4H5 51 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 OR1B1Q8NGR6 318 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 TRIM63Q969Q1 353 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 TMEM208Q9BTX3 173 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 RPRMQ9NS64 109 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 RABL2AQ9UBK7 228 aaPredicted RBP6.33□□□□□ -1.4
GGA3-207ENST00000578896 CACFD1Q9UGQ2 172 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 RABL2BQ9UNT1 228 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 DNAH5Q8TE73 4624 aa6.33□□□□□ -1.4
GGA3-207ENST00000578896 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
GGA3-207ENST00000578896 TRAV12-2A0A075B6T6 113 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 SMCO3A2RU48 225 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 SYNGR2O43760 224 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 ADAP1O75689 374 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 CCNKO75909 580 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 SNRPCP09234 159 aaKnown RBP6.32□□□□□ -1.4
GGA3-207ENST00000578896 AZU1P20160 251 aa6.32□□□□□ -1.4
GGA3-207ENST00000578896 GALR1P47211 349 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms