RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CAV2P51636 162 aa17.35■□□□□ 0.37
SNF8-217ENST00000576353 S100A10P60903 97 aa17.35■□□□□ 0.37
SNF8-217ENST00000576353 IL15RAQ13261 267 aa17.35■□□□□ 0.37
SNF8-217ENST00000576353 LEMD1Q68G75 181 aa17.35■□□□□ 0.37
SNF8-217ENST00000576353 CYP2G1PQ6ZSU1 146 aa17.35■□□□□ 0.37
SNF8-217ENST00000576353 OVOL2Q9BRP0 275 aa17.35■□□□□ 0.37
SNF8-217ENST00000576353 TP53TG1Q9Y2A0 90 aa17.35■□□□□ 0.37
SNF8-217ENST00000576353 DEDDO75618 318 aa17.34■□□□□ 0.37
SNF8-217ENST00000576353 ZNF688P0C7X2 276 aa17.34■□□□□ 0.37
SNF8-217ENST00000576353 SELENOTP62341 195 aa17.34■□□□□ 0.37
SNF8-217ENST00000576353 CSTL1Q9H114 145 aa17.34■□□□□ 0.37
SNF8-217ENST00000576353 SEPSECSQ9HD40 501 aaKnown RBP17.34■□□□□ 0.37
SNF8-217ENST00000576353 ORM2P19652 201 aa17.33■□□□□ 0.36
SNF8-217ENST00000576353 GATA2P23769 480 aaPredicted RBP17.33■□□□□ 0.36
SNF8-217ENST00000576353 SNRPD3P62318 126 aaKnown RBP17.33■□□□□ 0.36
SNF8-217ENST00000576353 RAB32Q13637 225 aa17.33■□□□□ 0.36
SNF8-217ENST00000576353 TEPPQ6URK8 271 aa17.33■□□□□ 0.36
SNF8-217ENST00000576353 OR8I2Q8N0Y5 310 aa17.33■□□□□ 0.36
SNF8-217ENST00000576353 TMEM147Q9BVK8 224 aa17.33■□□□□ 0.36
SNF8-217ENST00000576353 C11orf1Q9H5F2 150 aa17.33■□□□□ 0.36
SNF8-217ENST00000576353 GOSR2O14653 212 aa17.32■□□□□ 0.36
SNF8-217ENST00000576353 SPRY2O43597 315 aa17.32■□□□□ 0.36
SNF8-217ENST00000576353 ARL16Q0P5N6 197 aa17.32■□□□□ 0.36
SNF8-217ENST00000576353 TMEM182Q6ZP80 229 aaPredicted RBP17.32■□□□□ 0.36
SNF8-217ENST00000576353 STHQ8IWL8 128 aa17.32■□□□□ 0.36
SNF8-217ENST00000576353 HUWE1Q7Z6Z7 4374 aaKnown RBP17.31■□□□□ 0.36
SNF8-217ENST00000576353 CYCSP99999 105 aaKnown RBP17.31■□□□□ 0.36
SNF8-217ENST00000576353 OR1B1Q8NGR6 318 aa17.31■□□□□ 0.36
SNF8-217ENST00000576353 FAM24AA6NFZ4 105 aa17.3■□□□□ 0.36
SNF8-217ENST00000576353 LYL1P12980 280 aa17.3■□□□□ 0.36
SNF8-217ENST00000576353 SLC38A11Q08AI6 406 aa17.3■□□□□ 0.36
SNF8-217ENST00000576353 DEFB135Q30KP9 77 aa17.3■□□□□ 0.36
SNF8-217ENST00000576353 PSMG4Q5JS54 123 aa17.3■□□□□ 0.36
SNF8-217ENST00000576353 RNF183Q96D59 192 aa17.3■□□□□ 0.36
SNF8-217ENST00000576353 LYRM2Q9NU23 88 aaPredicted RBP17.3■□□□□ 0.36
SNF8-217ENST00000576353 ZNF98A6NK75 572 aa17.29■□□□□ 0.36
SNF8-217ENST00000576353 CST7O76096 145 aa17.29■□□□□ 0.36
SNF8-217ENST00000576353 SIX6O95475 246 aa17.29■□□□□ 0.36
SNF8-217ENST00000576353 RLN2P04090 185 aa17.29■□□□□ 0.36
SNF8-217ENST00000576353 RAP2BP61225 183 aa17.29■□□□□ 0.36
SNF8-217ENST00000576353 S100A7AQ86SG5 101 aa17.29■□□□□ 0.36
SNF8-217ENST00000576353 NMES1Q9C002 83 aa17.29■□□□□ 0.36
SNF8-217ENST00000576353 SSNA1O43805 119 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 HYPMO75409 117 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 LINC00869P0C866 280 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 ID1P41134 155 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 GALR1P47211 349 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 SULT1A1P50225 295 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 PLP1P60201 277 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 ZNF546Q86UE3 836 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 STX12Q86Y82 276 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 TMEM217Q8N7C4 229 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 GPR82Q96P67 336 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 SLC25A22Q9H936 323 aa17.28■□□□□ 0.36
SNF8-217ENST00000576353 S100A11P31949 105 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 HBG1P69891 147 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 HBG2P69892 147 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 RAB31Q13636 194 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 ACTL10Q5JWF8 245 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 SAMD13Q5VXD3 122 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 TMEM252Q8N6L7 170 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 IL17DQ8TAD2 202 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 DOK5Q9P104 306 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 HIGD1AQ9Y241 93 aa17.27■□□□□ 0.36
SNF8-217ENST00000576353 KNCNA6PVL3 124 aa17.26■□□□□ 0.35
SNF8-217ENST00000576353 AGPAT2O15120 278 aa17.26■□□□□ 0.35
SNF8-217ENST00000576353 OR5G3P0C626 314 aa17.26■□□□□ 0.35
SNF8-217ENST00000576353 PXDC1Q5TGL8 231 aa17.26■□□□□ 0.35
SNF8-217ENST00000576353 TRPT1Q86TN4 253 aaKnown RBP17.26■□□□□ 0.35
SNF8-217ENST00000576353 GATAD1Q8WUU5 269 aa17.26■□□□□ 0.35
SNF8-217ENST00000576353 SLC25A39Q9BZJ4 359 aaPredicted RBP17.26■□□□□ 0.35
SNF8-217ENST00000576353 CA1P00915 261 aaPredicted RBP17.25■□□□□ 0.35
SNF8-217ENST00000576353 MEOX2P50222 304 aa17.25■□□□□ 0.35
SNF8-217ENST00000576353 MORN3Q6PF18 240 aaPredicted RBP17.25■□□□□ 0.35
SNF8-217ENST00000576353 SHANK2-AS3Q9BTD1 123 aa17.25■□□□□ 0.35
SNF8-217ENST00000576353 SLC25A32Q9H2D1 315 aa17.25■□□□□ 0.35
SNF8-217ENST00000576353 UQCC1Q9NVA1 299 aa17.25■□□□□ 0.35
SNF8-217ENST00000576353 RNF24Q9Y225 148 aa17.25■□□□□ 0.35
SNF8-217ENST00000576353 IGSF23A1L1A6 192 aa17.24■□□□□ 0.35
SNF8-217ENST00000576353 E5RGE8 158 aa17.24■□□□□ 0.35
SNF8-217ENST00000576353 H3BRN7 92 aa17.24■□□□□ 0.35
SNF8-217ENST00000576353 SPP1P10451 314 aa17.24■□□□□ 0.35
SNF8-217ENST00000576353 PSMB3P49720 205 aa17.24■□□□□ 0.35
SNF8-217ENST00000576353 CASC10Q5T4H9 136 aa17.24■□□□□ 0.35
SNF8-217ENST00000576353 RSG1Q9BU20 258 aa17.24■□□□□ 0.35
SNF8-217ENST00000576353 ARL6Q9H0F7 186 aa17.24■□□□□ 0.35
SNF8-217ENST00000576353 ISLRO14498 428 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 PTTG1O95997 202 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 H2BFSP57053 126 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 ATP6V1FQ16864 119 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 VWC2Q2TAL6 325 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 TMEM41BQ5BJD5 291 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 LINC00052Q96N35 136 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 MGST2Q99735 147 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 SCRT1Q9BWW7 348 aa17.23■□□□□ 0.35
SNF8-217ENST00000576353 SOCS3O14543 225 aa17.22■□□□□ 0.35
SNF8-217ENST00000576353 CAMLGP49069 296 aa17.22■□□□□ 0.35
SNF8-217ENST00000576353 LRRC37A5PQ49AS3 106 aa17.22■□□□□ 0.35
SNF8-217ENST00000576353 SLC25A31Q9H0C2 315 aa17.22■□□□□ 0.35
SNF8-217ENST00000576353 WDR83OSQ9Y284 106 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms