RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 C3orf56Q8N813 242 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 LRRC20Q8TCA0 184 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 TMEM190Q8WZ59 177 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 RCC1LQ96I51 464 aaKnown RBP12.67□□□□□ -0.38
ERCC4-208ENST00000576348 DUX3Q96PT4 197 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 MRPL32Q9BYC8 188 aaKnown RBP12.67□□□□□ -0.38
ERCC4-208ENST00000576348 SLC25A22Q9H936 323 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 ZNF207O43670 478 aaKnown RBP12.66□□□□□ -0.38
ERCC4-208ENST00000576348 NPPCP23582 126 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 SLURP1P55000 103 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 SYNJ2BPP57105 145 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 BLOC1S1P78537 153 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 IFITM2Q01629 132 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 USF2Q15853 346 aaPredicted RBP12.66□□□□□ -0.38
ERCC4-208ENST00000576348 LURAP1LQ8IV03 231 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 RAX2Q96IS3 184 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 RNF24Q9Y225 148 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 FUT9Q9Y231 359 aa12.66□□□□□ -0.38
ERCC4-208ENST00000576348 CTXND1A0A1B0GTU2 59 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 TEX46H3BTG2 121 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 BMI1P35226 326 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 FHITP49789 147 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 TAS2R45P59539 299 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 LINC00305Q7Z4B0 112 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 TMEM37Q8WXS4 190 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 UHRF2Q96PU4 802 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
ERCC4-208ENST00000576348 PF4P02776 101 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 H2AFB1P0C5Y9 115 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 MYCNOSP40205 109 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 UNQ9165/PRO28630Q6UXU0 137 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 MIR17HGQ75NE6 70 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 REC114Q7Z4M0 266 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 IQCF2Q8IXL9 164 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 RPP25LQ8N5L8 163 aaKnown RBP12.64□□□□□ -0.39
ERCC4-208ENST00000576348 RAB24Q969Q5 203 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 GRAMD2BQ96HH9 432 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 SLC25A39Q9BZJ4 359 aaPredicted RBP12.64□□□□□ -0.39
ERCC4-208ENST00000576348 DAZ1Q9NQZ3 744 aaKnown RBP12.64□□□□□ -0.39
ERCC4-208ENST00000576348 TECRQ9NZ01 308 aaKnown RBP12.64□□□□□ -0.39
ERCC4-208ENST00000576348 MRPL27Q9P0M9 148 aaKnown RBP12.64□□□□□ -0.39
ERCC4-208ENST00000576348 PEMTQ9UBM1 199 aa12.64□□□□□ -0.39
ERCC4-208ENST00000576348 MAP1LC3B2A6NCE7 125 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 SEC14L6B5MCN3 397 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 M0QZ24 198 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 HMGB3O15347 200 aaKnown RBP12.63□□□□□ -0.39
ERCC4-208ENST00000576348 C8orf88P0DMB2 117 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 KLF5Q13887 457 aaPredicted RBP12.63□□□□□ -0.39
ERCC4-208ENST00000576348 KHDC3LQ587J8 217 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 SPATA31B1PQ5VZV4 182 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 LCN15Q6UWW0 184 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 OR4F17Q8NGA8 305 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 SFT2D1Q8WV19 159 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 SAT2Q96F10 170 aaPredicted RBP12.63□□□□□ -0.39
ERCC4-208ENST00000576348 OR4F4Q96R69 305 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 CITED1Q99966 193 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 SHANK2-AS3Q9BTD1 123 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 MAP1LC3BQ9GZQ8 125 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 TMEM231Q9H6L2 316 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 SEPSECSQ9HD40 501 aaKnown RBP12.63□□□□□ -0.39
ERCC4-208ENST00000576348 ATRQ13535 2644 aa12.63□□□□□ -0.39
ERCC4-208ENST00000576348 IGHV3-49A0A0A0MS15 119 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 A0A1B0GV50 99 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 A0A1W2PS18 150 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 ADARB2-AS1A8MUL3 147 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 H3BRN7 92 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 K7EMT4 169 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 LGALS9O00182 355 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 OR7C2O60412 319 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 HBE1P02100 147 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 SCRT1Q9BWW7 348 aa12.62□□□□□ -0.39
ERCC4-208ENST00000576348 IGHV3OR16-13A0A075B7E8 117 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 IGHV3-74A0A0B4J1X5 117 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 ZNF98A6NK75 572 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 RGS13O14921 159 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 EIF3GO75821 320 aaKnown RBP eCLIP12.61□□□□□ -0.39
ERCC4-208ENST00000576348 FHL3Q13643 280 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 TM4SF20Q53R12 229 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 LEMD1Q68G75 181 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 SHISA2Q6UWI4 295 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 OR8I2Q8N0Y5 310 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 STXBP6Q8NFX7 210 aa12.61□□□□□ -0.39
ERCC4-208ENST00000576348 PCNPQ8WW12 178 aaKnown RBP12.61□□□□□ -0.39
ERCC4-208ENST00000576348 TRAV5A0A0B4J249 113 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 IGHV3-66A0A0C4DH42 116 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 IGHV7-4-1A0A0J9YVY3 117 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 CXorf1O96002 111 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 CRYBB3P26998 211 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 FGF8P55075 233 aaPredicted RBP12.6□□□□□ -0.39
ERCC4-208ENST00000576348 ZNF726P1Q15940 193 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 OR9G4Q8NGQ1 327 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
ERCC4-208ENST00000576348 MARC2Q969Z3 335 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 ZNF414Q96IQ9 312 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 HRH4Q9H3N8 390 aa12.6□□□□□ -0.39
ERCC4-208ENST00000576348 A8MWP6 167 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms