RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 OR8I2Q8N0Y5 310 aa9.87□□□□□ -0.83
CCDC40-216ENST00000576241 RNF126Q9BV68 326 aa9.87□□□□□ -0.83
CCDC40-216ENST00000576241 WDR12Q9GZL7 423 aaKnown RBP9.87□□□□□ -0.83
CCDC40-216ENST00000576241 SAV1Q9H4B6 383 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-216ENST00000576241 CELA1Q9UNI1 258 aa9.87□□□□□ -0.83
CCDC40-216ENST00000576241 V9GYH0 126 aa9.87□□□□□ -0.83
CCDC40-216ENST00000576241 AGRNO00468 2067 aa9.87□□□□□ -0.83
CCDC40-216ENST00000576241 HERC1Q15751 4861 aa9.87□□□□□ -0.83
CCDC40-216ENST00000576241 DEFB131BA0A096LNP1 70 aa9.86□□□□□ -0.83
CCDC40-216ENST00000576241 SFT2D2O95562 160 aa9.86□□□□□ -0.83
CCDC40-216ENST00000576241 CFDP00746 253 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-216ENST00000576241 SPATA31B1PQ5VZV4 182 aa9.86□□□□□ -0.83
CCDC40-216ENST00000576241 GGNBP1Q5YKI7 109 aa9.86□□□□□ -0.83
CCDC40-216ENST00000576241 THAP8Q8NA92 274 aa9.86□□□□□ -0.83
CCDC40-216ENST00000576241 IGHV3OR16-12A0A075B7B8 117 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 TMEM189A5PLL7 270 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 WRBO00258 174 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 ISLRO14498 428 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 SYNGR2O43760 224 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 HOXB5P09067 269 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 MEOX2P50222 304 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 DEFB1P60022 68 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 PPP1R1AQ13522 171 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 ZNF79Q15937 498 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 GDF5OSQ5U4N7 250 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 EBLN2Q6P2I7 272 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 ZNF705AQ6ZN79 300 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-216ENST00000576241 ZNF767PQ75MW2 155 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 OR4B1Q8NGF8 309 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 CLUHP3Q96NS8 147 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 NEU1Q99519 415 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 MAGT1Q9H0U3 335 aa9.85□□□□□ -0.83
CCDC40-216ENST00000576241 IGKV1OR2-108A0A075B7D4 117 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 ZNF705FA8MVS1 300 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-216ENST00000576241 SOCS3O14543 225 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 AMBPP02760 352 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 ZNF705DP0CH99 300 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-216ENST00000576241 ZNF705BP0CI00 300 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-216ENST00000576241 S100A7P31151 101 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 GALR1P47211 349 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 INPP1P49441 399 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 EMP1P54849 157 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 FXYD7P58549 80 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 AKR1C1Q04828 323 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 SPANXN5Q5MJ07 72 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 SPANXN2Q5MJ10 180 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 SLC25A22Q9H936 323 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 RPRMQ9NS64 109 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 PLA2G2EQ9NZK7 142 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 SLC45A2Q9UMX9 530 aa9.84□□□□□ -0.83
CCDC40-216ENST00000576241 TEX48A0A1B0GUV7 120 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 UBE2MP61081 183 aaKnown RBP9.83□□□□□ -0.84
CCDC40-216ENST00000576241 PSG9Q00887 426 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 CCDC190Q86UF4 302 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 BPIFCQ8NFQ6 507 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 C16orf92Q96LL3 132 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 NDUFAF3Q9BU61 184 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 GOLT1BQ9Y3E0 138 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 STRAPQ9Y3F4 350 aaKnown RBP9.83□□□□□ -0.84
CCDC40-216ENST00000576241 RFNGQ9Y644 331 aa9.83□□□□□ -0.84
CCDC40-216ENST00000576241 PRSS46E5RG02 174 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 H3BP45 60 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 P0DMU3 169 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 FAM231AP0DMU4 169 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 FAM231CP0DMU5 169 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 ORM2P19652 201 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 PAX9P55771 341 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 FAM78BQ5VT40 261 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 ACOT7LQ6ZUV0 252 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 ZNF709Q8N972 641 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 GPR82Q96P67 336 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 TMEM147Q9BVK8 224 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 SLC35B3Q9H1N7 401 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 SLC25A32Q9H2D1 315 aa9.82□□□□□ -0.84
CCDC40-216ENST00000576241 DYNC1H1Q14204 4646 aaKnown RBP9.81□□□□□ -0.84
CCDC40-216ENST00000576241 A0A0J9YX75 114 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 SMCO3A2RU48 225 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 ZNF98A6NK75 572 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 F6UB75 175 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 HBE1P02100 147 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 TRIQKQ629K1 86 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 OR4D5Q8NGN0 318 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 OR1B1Q8NGR6 318 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 C7orf50Q9BRJ6 194 aaKnown RBP9.81□□□□□ -0.84
CCDC40-216ENST00000576241 RSG1Q9BU20 258 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 DOK5Q9P104 306 aa9.81□□□□□ -0.84
CCDC40-216ENST00000576241 DNAH6Q9C0G6 4158 aa9.8□□□□□ -0.84
CCDC40-216ENST00000576241 C9orf170A2RU37 121 aa9.8□□□□□ -0.84
CCDC40-216ENST00000576241 NAP1L6A6NFF2 107 aa9.8□□□□□ -0.84
CCDC40-216ENST00000576241 ADAP1O75689 374 aa9.8□□□□□ -0.84
CCDC40-216ENST00000576241 IFNA21P01568 189 aa9.8□□□□□ -0.84
CCDC40-216ENST00000576241 GATA2P23769 480 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-216ENST00000576241 GSG1LQ6UXU4 331 aa9.8□□□□□ -0.84
CCDC40-216ENST00000576241 SRRQ9GZT4 340 aa9.8□□□□□ -0.84
CCDC40-216ENST00000576241 FAT2Q9NYQ8 4349 aa9.8□□□□□ -0.84
CCDC40-216ENST00000576241 A0A1B0GVY2 172 aa9.79□□□□□ -0.84
CCDC40-216ENST00000576241 NDUFB6O95139 128 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms