RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RAP2BP61225 183 aa11.36□□□□□ -0.59
LITAF-217ENST00000575426 FCN2Q15485 313 aa11.36□□□□□ -0.59
LITAF-217ENST00000575426 ZNF546Q86UE3 836 aa11.36□□□□□ -0.59
LITAF-217ENST00000575426 GLMPQ8WWB7 406 aa11.36□□□□□ -0.59
LITAF-217ENST00000575426 WFDC10AQ9H1F0 79 aa11.36□□□□□ -0.59
LITAF-217ENST00000575426 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
LITAF-217ENST00000575426 H0YIZ8 118 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 AGPAT2O15120 278 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 HYPMO75409 117 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 OR5G3P0C626 314 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 LINC00869P0C866 280 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 CXCL3P19876 107 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 EWSR1Q01844 656 aaKnown RBP eCLIP11.35□□□□□ -0.59
LITAF-217ENST00000575426 NHLH2Q02577 135 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 BAXQ07812 192 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 SIGLEC15Q6ZMC9 328 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 TMEM182Q6ZP80 229 aaPredicted RBP11.35□□□□□ -0.59
LITAF-217ENST00000575426 OR8I2Q8N0Y5 310 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 THAP6Q8TBB0 222 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 FAM110AQ9BQ89 295 aa11.35□□□□□ -0.59
LITAF-217ENST00000575426 UBE2L5PA0A1B0GUS4 154 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 CAMLGP49069 296 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 PXDC1Q5TGL8 231 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 SBSPONQ8IVN8 264 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 OR11H7Q8NGC8 314 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 RNF126Q9BV68 326 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 ARL6Q9H0F7 186 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 ZMAT4Q9H898 229 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 DOK5Q9P104 306 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 HIGD1AQ9Y241 93 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 WDR83OSQ9Y284 106 aa11.34□□□□□ -0.59
LITAF-217ENST00000575426 FGF7P21781 194 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 PLP1P60201 277 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 FGL1Q08830 312 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 VWC2Q2TAL6 325 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 ODF3L2Q3SX64 289 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 Q6ZRG5 221 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 ASB13Q8WXK3 278 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 MGST2Q99735 147 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 SLC25A22Q9H936 323 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 MBD2Q9UBB5 411 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 RNF24Q9Y225 148 aa11.33□□□□□ -0.6
LITAF-217ENST00000575426 LOC102724200A0A096LPH7 203 aaPredicted RBP11.32□□□□□ -0.6
LITAF-217ENST00000575426 ZNF98A6NK75 572 aa11.32□□□□□ -0.6
LITAF-217ENST00000575426 K7EQG2 157 aa11.32□□□□□ -0.6
LITAF-217ENST00000575426 MPDU1O75352 247 aa11.32□□□□□ -0.6
LITAF-217ENST00000575426 RPL12P30050 165 aaKnown RBP11.32□□□□□ -0.6
LITAF-217ENST00000575426 GALR1P47211 349 aa11.32□□□□□ -0.6
LITAF-217ENST00000575426 NRN1Q9NPD7 142 aa11.32□□□□□ -0.6
LITAF-217ENST00000575426 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
LITAF-217ENST00000575426 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
LITAF-217ENST00000575426 COX7A2P2O60397 106 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 GIPP09681 153 aaPredicted RBP11.31□□□□□ -0.6
LITAF-217ENST00000575426 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
LITAF-217ENST00000575426 DEFB131AP59861 70 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 CLINT1Q14677 625 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 HAGHQ16775 308 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 APRG1Q8IVJ8 170 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 STPG3Q8N7X2 389 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 GPR82Q96P67 336 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 SLC25A39Q9BZJ4 359 aaPredicted RBP11.31□□□□□ -0.6
LITAF-217ENST00000575426 MAP6D1Q9H9H5 199 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 HSPB11Q9Y547 144 aa11.31□□□□□ -0.6
LITAF-217ENST00000575426 PRKDCP78527 4128 aaKnown RBP11.3□□□□□ -0.6
LITAF-217ENST00000575426 ELOA3CA0A087WX78 387 aaPredicted RBP11.3□□□□□ -0.6
LITAF-217ENST00000575426 LYL1P12980 280 aa11.3□□□□□ -0.6
LITAF-217ENST00000575426 SNRPD3P62318 126 aaKnown RBP11.3□□□□□ -0.6
LITAF-217ENST00000575426 LINC00322Q6ZN03 302 aaPredicted RBP11.3□□□□□ -0.6
LITAF-217ENST00000575426 OR1L4Q8NGR5 311 aa11.3□□□□□ -0.6
LITAF-217ENST00000575426 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
LITAF-217ENST00000575426 GGTLC1Q9BX51 225 aa11.3□□□□□ -0.6
LITAF-217ENST00000575426 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
LITAF-217ENST00000575426 H3BRN7 92 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 IFNA5P01569 189 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 ID1P41134 155 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 RPL29P47914 159 aaKnown RBP11.29□□□□□ -0.6
LITAF-217ENST00000575426 APOC4P55056 127 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 B2MP61769 119 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 C10orf113Q5VZT2 155 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 MIC13Q5XKP0 118 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 ZNF709Q8N972 641 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 CHAC2Q8WUX2 184 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 CITED4Q96RK1 184 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 PFDN5Q99471 154 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 SPATA25Q9BR10 227 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 SHANK2-AS3Q9BTD1 123 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 SLC25A32Q9H2D1 315 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
LITAF-217ENST00000575426 DNAJC4Q9NNZ3 241 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 U3KQK5 164 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
LITAF-217ENST00000575426 C17orf112F2Z3M2 114 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 RPL7P18124 248 aaKnown RBP11.28□□□□□ -0.6
LITAF-217ENST00000575426 ATF4P18848 351 aaPredicted RBP11.28□□□□□ -0.6
LITAF-217ENST00000575426 MEOX2P50222 304 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 OPCMLQ14982 345 aa11.28□□□□□ -0.6
LITAF-217ENST00000575426 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms