RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 AMBPP02760 352 aa18.62■□□□□ 0.57
NPLOC4-217ENST00000574897 COA6Q5JTJ3 125 aaKnown RBP18.62■□□□□ 0.57
NPLOC4-217ENST00000574897 Q8N9W7 124 aa18.62■□□□□ 0.57
NPLOC4-217ENST00000574897 OR1L6Q8NGR2 347 aa18.62■□□□□ 0.57
NPLOC4-217ENST00000574897 PACRGQ96M98 296 aaPredicted RBP18.62■□□□□ 0.57
NPLOC4-217ENST00000574897 Q9H3A6 140 aa18.62■□□□□ 0.57
NPLOC4-217ENST00000574897 MRPL27Q9P0M9 148 aaKnown RBP18.62■□□□□ 0.57
NPLOC4-217ENST00000574897 IGHV7-81A0A0B4J1V7 117 aa18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 EGR2P11161 476 aaPredicted RBP18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 IER3P46695 156 aa18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 PIP4P2Q8N4L2 257 aa18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 BTF3L4Q96K17 158 aa18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 ZNF586Q9NXT0 402 aa18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 YPEL3P61236 119 aaPredicted RBP18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 PRR27Q6MZM9 219 aa18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 HSPB9Q9BQS6 159 aa18.61■□□□□ 0.57
NPLOC4-217ENST00000574897 NPIPB5A8MRT5 1133 aa18.6■□□□□ 0.57
NPLOC4-217ENST00000574897 F8W735 103 aaPredicted RBP18.6■□□□□ 0.57
NPLOC4-217ENST00000574897 TBL2Q9Y4P3 447 aaKnown RBP18.6■□□□□ 0.57
NPLOC4-217ENST00000574897 IGHV3OR16-10A0A075B7F0 116 aa18.6■□□□□ 0.57
NPLOC4-217ENST00000574897 IL4P05112 153 aa18.6■□□□□ 0.57
NPLOC4-217ENST00000574897 PDLIM4P50479 330 aa18.6■□□□□ 0.57
NPLOC4-217ENST00000574897 ZNF491Q8N8L2 437 aa18.6■□□□□ 0.57
NPLOC4-217ENST00000574897 GRIFINA4D1Z8 144 aa18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 SH2D7A6NKC9 451 aaPredicted RBP18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 ZNF705GA8MUZ8 300 aaPredicted RBP18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 FABP1P07148 127 aa18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 C17orf77Q96MU5 243 aa18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 GNG7O60262 68 aa18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 OR2J3O76001 311 aa18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 NDUFB8O95169 186 aa18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 EXOC3-AS1Q8N2X6 119 aa18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 TTC9CQ8N5M4 171 aa18.59■□□□□ 0.57
NPLOC4-217ENST00000574897 UBE2G1P62253 170 aa18.58■□□□□ 0.56
NPLOC4-217ENST00000574897 TMEM183BQ1AE95 376 aa18.58■□□□□ 0.56
NPLOC4-217ENST00000574897 RNF125Q96EQ8 232 aa18.58■□□□□ 0.56
NPLOC4-217ENST00000574897 MRPL18Q9H0U6 180 aaKnown RBP18.58■□□□□ 0.56
NPLOC4-217ENST00000574897 TRAV9-1A0A075B6T8 112 aa18.57■□□□□ 0.56
NPLOC4-217ENST00000574897 TOMM40O96008 361 aa18.57■□□□□ 0.56
NPLOC4-217ENST00000574897 Q71RC1 249 aaPredicted RBP18.57■□□□□ 0.56
NPLOC4-217ENST00000574897 TMEM256Q8N2U0 113 aa18.57■□□□□ 0.56
NPLOC4-217ENST00000574897 FAM106CPP0CH98 169 aa18.57■□□□□ 0.56
NPLOC4-217ENST00000574897 USF2Q15853 346 aaPredicted RBP18.57■□□□□ 0.56
NPLOC4-217ENST00000574897 IGHV4-61A0A0C4DH41 118 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 SNURFLB1AK76 121 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 NUPR1O60356 82 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 SHANK2-AS3Q9BTD1 123 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 C7orf69Q9H7B7 122 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 CENPVL3A0A0U1RRI6 287 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 TMEM8BA6NDV4 472 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 H3BRN7 92 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 Q56UQ5 140 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 C5orf17Q8NAS9 161 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 NUDT10Q8NFP7 164 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 NUDT11Q96G61 164 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 CCL19Q99731 98 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 ATG101Q9BSB4 218 aa18.56■□□□□ 0.56
NPLOC4-217ENST00000574897 TRAV8-1A0A0A6YYK1 113 aa18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 TCRAP04437 139 aa18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 MRPL54Q6P161 138 aaKnown RBP18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 CSMD2Q7Z408 3487 aa18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 SMIM27A0A1W2PRY6 76 aa18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 NPFFO15130 113 aa18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 MFAP4P55083 255 aa18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 TMEM14CQ9P0S9 112 aa18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 KLF12Q9Y4X4 402 aa18.55■□□□□ 0.56
NPLOC4-217ENST00000574897 LINC01548A6NM66 108 aa18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 LINC00587B1AMM8 73 aa18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 HIST1H1EP10412 219 aaKnown RBP18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 FCGR2BP31994 310 aaPredicted RBP18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 LINC00322Q6ZN03 302 aaPredicted RBP18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 C21orf62Q9NYP8 219 aa18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 WI2-2373I1.2A0A1W2PRP0 233 aa18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 OR2T8A6NH00 312 aa18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 PRB1P04280 392 aa18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 ECSCRQ19T08 205 aa18.54■□□□□ 0.56
NPLOC4-217ENST00000574897 S100A12P80511 92 aa18.53■□□□□ 0.56
NPLOC4-217ENST00000574897 MBD6Q96DN6 1003 aa18.53■□□□□ 0.56
NPLOC4-217ENST00000574897 GATCO43716 136 aaKnown RBP18.53■□□□□ 0.56
NPLOC4-217ENST00000574897 TMEM68Q96MH6 324 aa18.53■□□□□ 0.56
NPLOC4-217ENST00000574897 TP53TG3Q9ULZ0 132 aa18.53■□□□□ 0.56
NPLOC4-217ENST00000574897 ATP6V0E1O15342 81 aa18.52■□□□□ 0.56
NPLOC4-217ENST00000574897 HLA-DRB1P01911 266 aa18.52■□□□□ 0.56
NPLOC4-217ENST00000574897 BRS3P32247 399 aa18.52■□□□□ 0.56
NPLOC4-217ENST00000574897 ASCL2Q99929 193 aa18.52■□□□□ 0.56
NPLOC4-217ENST00000574897 TMUB1Q9BVT8 246 aa18.52■□□□□ 0.56
NPLOC4-217ENST00000574897 F2Z2F3 143 aa18.52■□□□□ 0.55
NPLOC4-217ENST00000574897 GPR82Q96P67 336 aa18.52■□□□□ 0.55
NPLOC4-217ENST00000574897 MLST8Q9BVC4 326 aa18.52■□□□□ 0.55
NPLOC4-217ENST00000574897 C1RLQ9NZP8 487 aa18.52■□□□□ 0.55
NPLOC4-217ENST00000574897 FBXL7Q9UJT9 491 aa18.52■□□□□ 0.55
NPLOC4-217ENST00000574897 IGHV3OR16-8A0A075B7F1 116 aa18.51■□□□□ 0.55
NPLOC4-217ENST00000574897 IGHV3-35A0A0C4DH35 117 aa18.51■□□□□ 0.55
NPLOC4-217ENST00000574897 IGLC2P0DOY2 106 aa18.51■□□□□ 0.55
NPLOC4-217ENST00000574897 KIAA1644Q3SXP7 199 aa18.51■□□□□ 0.55
NPLOC4-217ENST00000574897 BRD3OSQ6XYD6 125 aa18.51■□□□□ 0.55
NPLOC4-217ENST00000574897 TMEM136Q6ZRR5 245 aa18.51■□□□□ 0.55
NPLOC4-217ENST00000574897 FAM231DQ6ZW35 169 aa18.51■□□□□ 0.55
NPLOC4-217ENST00000574897 BPIFA4PQ86YQ2 179 aa18.51■□□□□ 0.55
NPLOC4-217ENST00000574897 OTORQ9NRC9 128 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms