RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 TRAV10A0A0B4J240 114 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 SMIM23A6NLE4 172 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 F8W1H4 67 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 H3BRM9 83 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 J3QRK9 145 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 PDE6DO43924 150 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 HOXA6P31267 233 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 RNASE4P34096 147 aaKnown RBP0.14□□□□□ -2.39
CDC27-216ENST00000574304 SPINK7P58062 85 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 KRR1Q13601 381 aaKnown RBP0.14□□□□□ -2.39
CDC27-216ENST00000574304 PDZD9Q8IXQ8 264 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 PSMF1Q92530 271 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 PRRT1Q99946 306 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 TMEM138Q9NPI0 162 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 PLAC8Q9NZF1 115 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 PCTPQ9UKL6 214 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 NOSIPQ9Y314 301 aaKnown RBP0.14□□□□□ -2.39
CDC27-216ENST00000574304 TNCP24821 2201 aa0.14□□□□□ -2.39
CDC27-216ENST00000574304 IGLV3-32A0A0A0MS00 114 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 KPNA3O00505 521 aaPredicted RBP0.13□□□□□ -2.39
CDC27-216ENST00000574304 KDELR1P24390 212 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 AESQ08117 197 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 LYRM7Q5U5X0 104 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 C4orf22Q6V702 233 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 TEN1Q86WV5 123 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 OR51A2Q8NGJ7 313 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 OR5D14Q8NGL3 314 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 TRIM4Q9C037 500 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 WFDC10AQ9H1F0 79 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 TMEM133Q9H2Q1 129 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.13□□□□□ -2.39
CDC27-216ENST00000574304 MED29Q9NX70 200 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 GLTPQ9NZD2 209 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 TET1Q8NFU7 2136 aa0.13□□□□□ -2.39
CDC27-216ENST00000574304 PHRF1Q9P1Y6 1649 aaKnown RBP0.13□□□□□ -2.39
CDC27-216ENST00000574304 NDUFB3O43676 98 aa0.12□□□□□ -2.39
CDC27-216ENST00000574304 RPP14O95059 124 aaKnown RBP0.12□□□□□ -2.39
CDC27-216ENST00000574304 EXOC3-AS1Q8N2X6 119 aa0.12□□□□□ -2.39
CDC27-216ENST00000574304 OR10K1Q8NGX5 313 aa0.12□□□□□ -2.39
CDC27-216ENST00000574304 FANCMQ8IYD8 2048 aa0.12□□□□□ -2.39
CDC27-216ENST00000574304 PTPRFP10586 1907 aa0.12□□□□□ -2.39
CDC27-216ENST00000574304 SIP14410 1827 aa0.12□□□□□ -2.39
CDC27-216ENST00000574304 MUC4Q99102 2169 aa0.12□□□□□ -2.39
CDC27-216ENST00000574304 TNS3Q68CZ2 1445 aa0.12□□□□□ -2.39
CDC27-216ENST00000574304 ADCY9O60503 1353 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 TRGV10A0A0A0MS01 117 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 NUPR2A6NF83 97 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 B4DSR2 109 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 SERPINB9P50453 376 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 ZNF833PQ6ZTB9 187 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 TSKUQ8WUA8 353 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 SLC25A21Q9BQT8 299 aaPredicted RBP0.11□□□□□ -2.39
CDC27-216ENST00000574304 TMEM126AQ9H061 195 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 LY96Q9Y6Y9 160 aa0.11□□□□□ -2.39
CDC27-216ENST00000574304 ERC2-IT1O76042 136 aa0.1□□□□□ -2.39
CDC27-216ENST00000574304 PIGPP57054 158 aa0.1□□□□□ -2.39
CDC27-216ENST00000574304 ROMO1P60602 79 aa0.1□□□□□ -2.39
CDC27-216ENST00000574304 RANP62826 216 aaKnown RBP0.1□□□□□ -2.39
CDC27-216ENST00000574304 ITGB3BPQ13352 177 aaPredicted RBP0.1□□□□□ -2.39
CDC27-216ENST00000574304 EDDM3AQ14507 147 aa0.1□□□□□ -2.39
CDC27-216ENST00000574304 PTRHD1Q6GMV3 140 aaKnown RBP0.1□□□□□ -2.39
CDC27-216ENST00000574304 GRINAQ7Z429 371 aa0.1□□□□□ -2.39
CDC27-216ENST00000574304 Q8TAT8 98 aa0.1□□□□□ -2.39
CDC27-216ENST00000574304 LINC00467Q9BRT7 94 aa0.1□□□□□ -2.39
CDC27-216ENST00000574304 GGACTQ9BVM4 153 aa0.1□□□□□ -2.39
CDC27-216ENST00000574304 RTL1A6NKG5 1358 aa0.09□□□□□ -2.39
CDC27-216ENST00000574304 ARHGEF11O15085 1522 aa0.09□□□□□ -2.39
CDC27-216ENST00000574304 KCPQ6ZWJ8 1503 aa0.09□□□□□ -2.39
CDC27-216ENST00000574304 TRAV23DV6A0A075B6W5 121 aa0.09□□□□□ -2.4
CDC27-216ENST00000574304 A8MWV9 139 aa0.09□□□□□ -2.4
CDC27-216ENST00000574304 CST8O60676 142 aa0.09□□□□□ -2.4
CDC27-216ENST00000574304 SPINT3P49223 89 aa0.09□□□□□ -2.4
CDC27-216ENST00000574304 DSCR4P56555 118 aaPredicted RBP0.09□□□□□ -2.4
CDC27-216ENST00000574304 C6orf52Q5T4I8 152 aa0.09□□□□□ -2.4
CDC27-216ENST00000574304 CANT1Q8WVQ1 401 aa0.09□□□□□ -2.4
CDC27-216ENST00000574304 KDM6AO15550 1401 aaPredicted RBP0.09□□□□□ -2.4
CDC27-216ENST00000574304 MYO5AQ9Y4I1 1855 aaKnown RBP0.09□□□□□ -2.4
CDC27-216ENST00000574304 CECR2Q9BXF3 1484 aa0.09□□□□□ -2.4
CDC27-216ENST00000574304 PIK3C2GO75747 1445 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 E7EUB6 86 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 K7EIL1 84 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 PPYP01298 95 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 TCRBP04435 133 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 ERP29P30040 261 aaKnown RBP0.08□□□□□ -2.4
CDC27-216ENST00000574304 ZNF137PP52743 207 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 CEBPGP53567 150 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 LSM6P62312 80 aaKnown RBP0.08□□□□□ -2.4
CDC27-216ENST00000574304 HIST1H3AP68431 136 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 H3F3AP84243 136 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 CDK6Q00534 326 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 RRN3P1Q2M238 152 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 C1orf134Q5TEV5 83 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 C22orf39Q6P5X5 142 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 YPEL2Q96QA6 119 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 RNF122Q9H9V4 155 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 ZDBF2Q9HCK1 2354 aa0.08□□□□□ -2.4
CDC27-216ENST00000574304 NIPSNAP2O75323 286 aa0.07□□□□□ -2.4
CDC27-216ENST00000574304 CXCL8P10145 99 aa0.07□□□□□ -2.4
CDC27-216ENST00000574304 COX7CP15954 63 aa0.07□□□□□ -2.4
CDC27-216ENST00000574304 BCL2L15Q5TBC7 163 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms