RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 U3KQE9 123 aa8.28□□□□□ -1.08
CHD3-216ENST00000573936 DYNC2H1Q8NCM8 4307 aaKnown RBP8.28□□□□□ -1.08
CHD3-216ENST00000573936 HUWE1Q7Z6Z7 4374 aaKnown RBP8.28□□□□□ -1.08
CHD3-216ENST00000573936 IGHV3OR16-13A0A075B7E8 117 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 IGHV3-74A0A0B4J1X5 117 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 TRAV2A0A0B4J234 112 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 A8MZ25 164 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 DNASE2O00115 360 aaPredicted RBP8.27□□□□□ -1.09
CHD3-216ENST00000573936 RPL11P62913 178 aaKnown RBP8.27□□□□□ -1.09
CHD3-216ENST00000573936 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 ZNF546Q86UE3 836 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 TMEM217Q8N7C4 229 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 B9D2Q9BPU9 175 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 TMEM147Q9BVK8 224 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 TUBA4BQ9H853 241 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 UQCC1Q9NVA1 299 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 TNFSF18Q9UNG2 199 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 SELENOKQ9Y6D0 94 aa8.27□□□□□ -1.09
CHD3-216ENST00000573936 IGHV3-66A0A0C4DH42 116 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 HELTA6NFD8 242 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 DFFBO76075 338 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 CD7P09564 240 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 RPL12P30050 165 aaKnown RBP8.26□□□□□ -1.09
CHD3-216ENST00000573936 EWSR1Q01844 656 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHD3-216ENST00000573936 VWC2Q2TAL6 325 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 ZFP69Q49AA0 526 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 C1orf194Q5T5A4 169 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 PXDC1Q5TGL8 231 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 PPP1R14BQ96C90 147 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 AQP10Q96PS8 301 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 FAM110AQ9BQ89 295 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 FBXL17Q9UF56 701 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 RNF24Q9Y225 148 aa8.26□□□□□ -1.09
CHD3-216ENST00000573936 RNF222A6NCQ9 220 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 HMSDA8MTL9 139 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 OR11H12B2RN74 326 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 AGPAT2O15120 278 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 ARPC5O15511 151 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 BUB3O43684 328 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 MPDU1O75352 247 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 NHLRC4P0CG21 123 aaPredicted RBP8.25□□□□□ -1.09
CHD3-216ENST00000573936 IGHV4-30-4P0DP06 118 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 ORM2P19652 201 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 PLP1P60201 277 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 NHLH2Q02577 135 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
CHD3-216ENST00000573936 GLMPQ8WWB7 406 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 WDR83OSQ9Y284 106 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 HSPB11Q9Y547 144 aa8.25□□□□□ -1.09
CHD3-216ENST00000573936 SACSQ9NZJ4 4579 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 IGKV3-7A0A075B6H7 116 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 BOLA2-SMG1P6H3BVE0 249 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 HYPMO75409 117 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 LINC00869P0C866 280 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 CXCL2P19875 107 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 GATA2P23769 480 aaPredicted RBP8.24□□□□□ -1.09
CHD3-216ENST00000573936 CAMLGP49069 296 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 SIGLEC15Q6ZMC9 328 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 TMEM182Q6ZP80 229 aaPredicted RBP8.24□□□□□ -1.09
CHD3-216ENST00000573936 GBGT1Q8N5D6 347 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 INO80EQ8NBZ0 244 aaPredicted RBP8.24□□□□□ -1.09
CHD3-216ENST00000573936 OR1B1Q8NGR6 318 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 HYLS1Q96M11 299 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 MFFQ9GZY8 342 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 MS4A6AQ9H2W1 248 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 C19orf73Q9NVV2 129 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 U3KQK5 164 aa8.24□□□□□ -1.09
CHD3-216ENST00000573936 UBE2L5PA0A1B0GUS4 154 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 C3orf84H3BNL1 204 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 FRMD6-AS1P0C7T7 363 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 TFPI2P48307 235 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 NKX2-5P52952 324 aaPredicted RBP8.23□□□□□ -1.09
CHD3-216ENST00000573936 Q6ZRG5 221 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 WFDC3Q8IUB2 231 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 OR8I2Q8N0Y5 310 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 DEFB125Q8N687 156 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 STXBP6Q8NFX7 210 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 OR5C1Q8NGR4 320 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 GPR82Q96P67 336 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 MGST2Q99735 147 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 SRD5A3Q9H8P0 318 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 SEPSECSQ9HD40 501 aaKnown RBP8.23□□□□□ -1.09
CHD3-216ENST00000573936 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
CHD3-216ENST00000573936 ELOA3CA0A087WX78 387 aaPredicted RBP8.22□□□□□ -1.09
CHD3-216ENST00000573936 ZNF98A6NK75 572 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 K7EQG2 157 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 OR5G3P0C626 314 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 FGF7P21781 194 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 GALR1P47211 349 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 RPL29P47914 159 aaKnown RBP8.22□□□□□ -1.09
CHD3-216ENST00000573936 ZNF345Q14585 488 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 LGALSLQ3ZCW2 172 aaPredicted RBP8.22□□□□□ -1.09
CHD3-216ENST00000573936 C9orf62Q8N4C0 152 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 KCNRGQ8N5I3 272 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 STPG3Q8N7X2 389 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 OR1L4Q8NGR5 311 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 SLC25A39Q9BZJ4 359 aaPredicted RBP8.22□□□□□ -1.09
CHD3-216ENST00000573936 SMIM3Q9BZL3 60 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 ARL6Q9H0F7 186 aa8.22□□□□□ -1.09
CHD3-216ENST00000573936 WFDC1Q9HC57 220 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms