RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 SLC35E1Q96K37 410 aa15.61■□□□□ 0.09
SNF8-216ENST00000573795 FAM210BQ96KR6 192 aa15.61■□□□□ 0.09
SNF8-216ENST00000573795 C17orf77Q96MU5 243 aa15.61■□□□□ 0.09
SNF8-216ENST00000573795 NIPSNAP3BQ9BS92 247 aa15.61■□□□□ 0.09
SNF8-216ENST00000573795 ALDH3B2P48448 385 aa15.6■□□□□ 0.09
SNF8-216ENST00000573795 OR2F1Q13607 317 aa15.6■□□□□ 0.09
SNF8-216ENST00000573795 FAM78BQ5VT40 261 aa15.6■□□□□ 0.09
SNF8-216ENST00000573795 COQ8AQ8NI60 647 aa15.6■□□□□ 0.09
SNF8-216ENST00000573795 DIRAS2Q96HU8 199 aa15.6■□□□□ 0.09
SNF8-216ENST00000573795 C20orf173Q96LM9 149 aa15.6■□□□□ 0.09
SNF8-216ENST00000573795 PFDN2Q9UHV9 154 aa15.6■□□□□ 0.09
SNF8-216ENST00000573795 A0A0J9YX75 114 aa15.59■□□□□ 0.09
SNF8-216ENST00000573795 ISLRO14498 428 aa15.59■□□□□ 0.09
SNF8-216ENST00000573795 PITX3O75364 302 aa15.59■□□□□ 0.09
SNF8-216ENST00000573795 AKR1C4P17516 323 aa15.59■□□□□ 0.09
SNF8-216ENST00000573795 ATP5IP56385 69 aaPredicted RBP15.59■□□□□ 0.09
SNF8-216ENST00000573795 PSG9Q00887 426 aa15.59■□□□□ 0.09
SNF8-216ENST00000573795 SCP2D1Q9UJQ7 156 aa15.59■□□□□ 0.09
SNF8-216ENST00000573795 TEX48A0A1B0GUV7 120 aa15.58■□□□□ 0.08
SNF8-216ENST00000573795 A8MTW9 85 aa15.58■□□□□ 0.08
SNF8-216ENST00000573795 OXA1LQ15070 435 aa15.58■□□□□ 0.08
SNF8-216ENST00000573795 SPATA31B1PQ5VZV4 182 aa15.58■□□□□ 0.08
SNF8-216ENST00000573795 UBE2DNLQ8IWF7 75 aa15.58■□□□□ 0.08
SNF8-216ENST00000573795 THAP8Q8NA92 274 aa15.58■□□□□ 0.08
SNF8-216ENST00000573795 TRGV9Q99603 122 aa15.58■□□□□ 0.08
SNF8-216ENST00000573795 YTHDF2Q9Y5A9 579 aaKnown RBP15.58■□□□□ 0.08
SNF8-216ENST00000573795 LOC102723971A0A1B0GUV8 181 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 SNRPGP15A8MWD9 76 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 IFNA21P01568 189 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 AMTNQ6UX39 209 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 OR1S1Q8NH92 325 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 DYNC2LI1Q8TCX1 351 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 SCGB3A2Q96PL1 93 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 RABL2AQ9UBK7 228 aaPredicted RBP15.57■□□□□ 0.08
SNF8-216ENST00000573795 RABL2BQ9UNT1 228 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 GOLT1BQ9Y3E0 138 aa15.57■□□□□ 0.08
SNF8-216ENST00000573795 HBE1P02100 147 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 IAPPP10997 89 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 HTN3P15516 51 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 EBLN2Q6P2I7 272 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 GPR141Q7Z602 305 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 OR8I2Q8N0Y5 310 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 SOSTQ9BQB4 213 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 SLC25A32Q9H2D1 315 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 MCUBQ9NWR8 336 aa15.56■□□□□ 0.08
SNF8-216ENST00000573795 CCDC59Q9P031 241 aaKnown RBP15.56■□□□□ 0.08
SNF8-216ENST00000573795 PRSS46E5RG02 174 aa15.55■□□□□ 0.08
SNF8-216ENST00000573795 FABP1P07148 127 aa15.55■□□□□ 0.08
SNF8-216ENST00000573795 SRPXP78539 464 aa15.55■□□□□ 0.08
SNF8-216ENST00000573795 RNF212Q495C1 297 aa15.55■□□□□ 0.08
SNF8-216ENST00000573795 TMEM88Q6PEY1 159 aa15.55■□□□□ 0.08
SNF8-216ENST00000573795 PPP1R14BQ96C90 147 aa15.55■□□□□ 0.08
SNF8-216ENST00000573795 MRPS26Q9BYN8 205 aaKnown RBP15.55■□□□□ 0.08
SNF8-216ENST00000573795 ANXA3P12429 323 aa15.54■□□□□ 0.08
SNF8-216ENST00000573795 RRN3P1Q2M238 152 aa15.54■□□□□ 0.08
SNF8-216ENST00000573795 ZNF575Q86XF7 245 aa15.54■□□□□ 0.08
SNF8-216ENST00000573795 C7orf50Q9BRJ6 194 aaKnown RBP15.54■□□□□ 0.08
SNF8-216ENST00000573795 RPRMQ9NS64 109 aa15.54■□□□□ 0.08
SNF8-216ENST00000573795 DOK5Q9P104 306 aa15.54■□□□□ 0.08
SNF8-216ENST00000573795 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.53■□□□□ 0.08
SNF8-216ENST00000573795 TMEM182Q6ZP80 229 aaPredicted RBP15.53■□□□□ 0.08
SNF8-216ENST00000573795 C16orf92Q96LL3 132 aa15.53■□□□□ 0.08
SNF8-216ENST00000573795 RSL24D1Q9UHA3 163 aaKnown RBP15.53■□□□□ 0.08
SNF8-216ENST00000573795 APOBP04114 4563 aaKnown RBP15.53■□□□□ 0.08
SNF8-216ENST00000573795 DUXBA0A1W2PPF3 345 aa15.52■□□□□ 0.08
SNF8-216ENST00000573795 ZNF98A6NK75 572 aa15.52■□□□□ 0.08
SNF8-216ENST00000573795 PRM2P04554 102 aa15.52■□□□□ 0.08
SNF8-216ENST00000573795 MEOX2P50222 304 aa15.52■□□□□ 0.08
SNF8-216ENST00000573795 RAB11AP62491 216 aa15.52■□□□□ 0.08
SNF8-216ENST00000573795 SAMD13Q5VXD3 122 aa15.52■□□□□ 0.08
SNF8-216ENST00000573795 IGF2BP2-AS1Q96M15 143 aa15.52■□□□□ 0.08
SNF8-216ENST00000573795 CRXO43186 299 aaPredicted RBP15.51■□□□□ 0.07
SNF8-216ENST00000573795 GATA2P23769 480 aaPredicted RBP15.51■□□□□ 0.07
SNF8-216ENST00000573795 DAD1P61803 113 aa15.51■□□□□ 0.07
SNF8-216ENST00000573795 LRTM2Q8N967 370 aa15.51■□□□□ 0.07
SNF8-216ENST00000573795 RSG1Q9BU20 258 aa15.51■□□□□ 0.07
SNF8-216ENST00000573795 KRTAP4-5Q9BYR2 181 aa15.51■□□□□ 0.07
SNF8-216ENST00000573795 SLIRPQ9GZT3 109 aaKnown RBP15.51■□□□□ 0.07
SNF8-216ENST00000573795 MAGT1Q9H0U3 335 aa15.51■□□□□ 0.07
SNF8-216ENST00000573795 SLC25A22Q9H936 323 aa15.51■□□□□ 0.07
SNF8-216ENST00000573795 SLC45A2Q9UMX9 530 aa15.51■□□□□ 0.07
SNF8-216ENST00000573795 TRAV8-2A0A0B4J237 113 aa15.5■□□□□ 0.07
SNF8-216ENST00000573795 SLC25A6P12236 298 aa15.5■□□□□ 0.07
SNF8-216ENST00000573795 GALR1P47211 349 aa15.5■□□□□ 0.07
SNF8-216ENST00000573795 TMED4Q7Z7H5 227 aa15.5■□□□□ 0.07
SNF8-216ENST00000573795 RAB2BQ8WUD1 216 aa15.5■□□□□ 0.07
SNF8-216ENST00000573795 PAIP2BQ9ULR5 123 aaKnown RBP15.5■□□□□ 0.07
SNF8-216ENST00000573795 CFDP00746 253 aaPredicted RBP15.49■□□□□ 0.07
SNF8-216ENST00000573795 TNFSF8P32971 234 aa15.49■□□□□ 0.07
SNF8-216ENST00000573795 CNN1P51911 297 aaKnown RBP15.49■□□□□ 0.07
SNF8-216ENST00000573795 GGNBP1Q5YKI7 109 aa15.49■□□□□ 0.07
SNF8-216ENST00000573795 IGFL4Q6B9Z1 124 aa15.49■□□□□ 0.07
SNF8-216ENST00000573795 OR11H7Q8NGC8 314 aa15.49■□□□□ 0.07
SNF8-216ENST00000573795 TRIM63Q969Q1 353 aa15.49■□□□□ 0.07
SNF8-216ENST00000573795 DNAH5Q8TE73 4624 aa15.48■□□□□ 0.07
SNF8-216ENST00000573795 ZNF705GA8MUZ8 300 aaPredicted RBP15.48■□□□□ 0.07
SNF8-216ENST00000573795 M0R2Z0 102 aa15.48■□□□□ 0.07
SNF8-216ENST00000573795 SPINK13Q1W4C9 94 aa15.48■□□□□ 0.07
SNF8-216ENST00000573795 TMEM128Q5BJH2 165 aa15.48■□□□□ 0.07
SNF8-216ENST00000573795 OR4D5Q8NGN0 318 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms