RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 C7orf66A4D0T2 115 aa14.77□□□□□ -0.05
NUP88-204ENST00000572290 IL5P05113 134 aa14.77□□□□□ -0.05
NUP88-204ENST00000572290 RRAS2P62070 204 aaPredicted RBP14.77□□□□□ -0.05
NUP88-204ENST00000572290 DLK1P80370 383 aa14.77□□□□□ -0.05
NUP88-204ENST00000572290 TMEM182Q6ZP80 229 aaPredicted RBP14.77□□□□□ -0.05
NUP88-204ENST00000572290 TRPT1Q86TN4 253 aaKnown RBP14.77□□□□□ -0.05
NUP88-204ENST00000572290 SLC45A2Q9UMX9 530 aa14.77□□□□□ -0.05
NUP88-204ENST00000572290 DYNC2H1Q8NCM8 4307 aaKnown RBP14.76□□□□□ -0.05
NUP88-204ENST00000572290 L7N2F9 121 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 ORM2P19652 201 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 VAMP2P63027 116 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 IFITM3Q01628 133 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 ACTL10Q5JWF8 245 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 CYP2G1PQ6ZSU1 146 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 OR8I2Q8N0Y5 310 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 C2orf50Q96LR7 162 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 NPVFQ9HCQ7 196 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 MGAT4CQ9UBM8 478 aa14.76□□□□□ -0.05
NUP88-204ENST00000572290 LSM5Q9Y4Y9 91 aaKnown RBP14.76□□□□□ -0.05
NUP88-204ENST00000572290 FNDC10F2Z333 226 aa14.75□□□□□ -0.05
NUP88-204ENST00000572290 K7EPK0 472 aa14.75□□□□□ -0.05
NUP88-204ENST00000572290 SPP1P10451 314 aa14.75□□□□□ -0.05
NUP88-204ENST00000572290 MORN3Q6PF18 240 aaPredicted RBP14.75□□□□□ -0.05
NUP88-204ENST00000572290 GSG1LQ6UXU4 331 aa14.75□□□□□ -0.05
NUP88-204ENST00000572290 RARRES2Q99969 163 aa14.75□□□□□ -0.05
NUP88-204ENST00000572290 TMEM147Q9BVK8 224 aa14.75□□□□□ -0.05
NUP88-204ENST00000572290 S100A7P31151 101 aa14.74□□□□□ -0.05
NUP88-204ENST00000572290 OR1B1Q8NGR6 318 aa14.74□□□□□ -0.05
NUP88-204ENST00000572290 SACSQ9NZJ4 4579 aa14.74□□□□□ -0.05
NUP88-204ENST00000572290 ZNF98A6NK75 572 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 ID1P41134 155 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 BCAP31P51572 246 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 SELENOTP62341 195 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 ARL16Q0P5N6 197 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 TMEM41BQ5BJD5 291 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 TMEM217Q8N7C4 229 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 OR11H2Q8NH07 326 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 GGACTQ9BVM4 153 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 SLC25A22Q9H936 323 aa14.73□□□□□ -0.05
NUP88-204ENST00000572290 GPN1Q9HCN4 374 aaPredicted RBP14.73□□□□□ -0.05
NUP88-204ENST00000572290 GALR1P47211 349 aa14.72□□□□□ -0.05
NUP88-204ENST00000572290 EWSR1Q01844 656 aaKnown RBP eCLIP14.72□□□□□ -0.05
NUP88-204ENST00000572290 TEPPQ6URK8 271 aa14.72□□□□□ -0.05
NUP88-204ENST00000572290 SLC25A32Q9H2D1 315 aa14.72□□□□□ -0.05
NUP88-204ENST00000572290 DOK5Q9P104 306 aa14.72□□□□□ -0.05
NUP88-204ENST00000572290 RYR2Q92736 4967 aa14.72□□□□□ -0.05
NUP88-204ENST00000572290 CSMD3Q7Z407 3707 aa14.72□□□□□ -0.05
NUP88-204ENST00000572290 SOCS3O14543 225 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 DEDDO75618 318 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 GIG44P09565 113 aaPredicted RBP14.71□□□□□ -0.05
NUP88-204ENST00000572290 LINC00869P0C866 280 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 ATF4P18848 351 aaPredicted RBP14.71□□□□□ -0.05
NUP88-204ENST00000572290 PVALBP20472 110 aaPredicted RBP14.71□□□□□ -0.05
NUP88-204ENST00000572290 PSMB3P49720 205 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 CAV2P51636 162 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 S100A10P60903 97 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 RAP2BP61225 183 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 NRARPQ7Z6K4 114 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 LINC00052Q96N35 136 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 C11orf1Q9H5F2 150 aa14.71□□□□□ -0.05
NUP88-204ENST00000572290 HYPMO75409 117 aa14.7□□□□□ -0.06
NUP88-204ENST00000572290 C4BPBP20851 252 aa14.7□□□□□ -0.06
NUP88-204ENST00000572290 MEOX2P50222 304 aa14.7□□□□□ -0.06
NUP88-204ENST00000572290 PLP1P60201 277 aa14.7□□□□□ -0.06
NUP88-204ENST00000572290 SLC38A11Q08AI6 406 aa14.7□□□□□ -0.06
NUP88-204ENST00000572290 IL15RAQ13261 267 aa14.7□□□□□ -0.06
NUP88-204ENST00000572290 SAMD13Q5VXD3 122 aa14.7□□□□□ -0.06
NUP88-204ENST00000572290 HIGD1AQ9Y241 93 aa14.7□□□□□ -0.06
NUP88-204ENST00000572290 FAM24AA6NFZ4 105 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 INMT-MINDY4F8WBC2 141 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 H3BMM0 161 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 H3BRN7 92 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 PRAF2O60831 178 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 DEFA1P59665 94 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 DEFA3P59666 94 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 RAB32Q13637 225 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 PMS2P11Q13670 270 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 GPR82Q96P67 336 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 RSG1Q9BU20 258 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 SCRT1Q9BWW7 348 aa14.69□□□□□ -0.06
NUP88-204ENST00000572290 SLC25A39Q9BZJ4 359 aaPredicted RBP14.69□□□□□ -0.06
NUP88-204ENST00000572290 LCE6AA0A183 80 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 CXorf65A6NEN9 183 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 ISLRO14498 428 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 CST7O76096 145 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 OR5G3P0C626 314 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 HLA-DRB4P13762 266 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 NUTF2P61970 127 aaKnown RBP14.68□□□□□ -0.06
NUP88-204ENST00000572290 S100A7AQ86SG5 101 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 ZNF546Q86UE3 836 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 C16orf92Q96LL3 132 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 SHANK2-AS3Q9BTD1 123 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 HLA-DRB4X5D2U9 266 aa14.68□□□□□ -0.06
NUP88-204ENST00000572290 PLECQ15149 4684 aaKnown RBP14.67□□□□□ -0.06
NUP88-204ENST00000572290 GOSR2O14653 212 aa14.67□□□□□ -0.06
NUP88-204ENST00000572290 AGPAT2O15120 278 aa14.67□□□□□ -0.06
NUP88-204ENST00000572290 FOXI2Q6ZQN5 318 aa14.67□□□□□ -0.06
NUP88-204ENST00000572290 ARL6Q9H0F7 186 aa14.67□□□□□ -0.06
NUP88-204ENST00000572290 C11orf68Q9H3H3 251 aaKnown RBP14.67□□□□□ -0.06
NUP88-204ENST00000572290 LYRM2Q9NU23 88 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms