RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 FXYD6Q9H0Q3 95 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 PPP1R14DQ9NXH3 145 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 SMIM30A4D0T7 59 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 EVI2AP22794 236 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 HTR2BP41595 481 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 AKR1C2P52895 323 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 TAS2R20P59543 309 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 GAMTQ14353 236 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 BSXQ3C1V8 233 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 Q6ZSA8 131 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 OR8I2Q8N0Y5 310 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 NPIPB3Q92617 1050 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 ACY3Q96HD9 319 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 VSIG2Q96IQ7 327 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 LINC00467Q9BRT7 94 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 SLC25A39Q9BZJ4 359 aaPredicted RBP8.78□□□□□ -1
CCDC40-208ENST00000572270 TMPRSS5Q9H3S3 457 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 S100A14Q9HCY8 104 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 RHBDL2Q9NX52 303 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 SCN3BQ9NY72 215 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 ICOSQ9Y6W8 199 aa8.78□□□□□ -1
CCDC40-208ENST00000572270 MEIS3P1A6NDR6 274 aa8.77□□□□□ -1.01
CCDC40-208ENST00000572270 SNURFLB1AK76 121 aa8.77□□□□□ -1.01
CCDC40-208ENST00000572270 RFX2P48378 723 aa8.77□□□□□ -1.01
CCDC40-208ENST00000572270 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
CCDC40-208ENST00000572270 RNASEH2CQ8TDP1 164 aaKnown RBP8.77□□□□□ -1.01
CCDC40-208ENST00000572270 LRCOL1A6NCL2 159 aa8.76□□□□□ -1.01
CCDC40-208ENST00000572270 NOTOA8MTQ0 251 aa8.76□□□□□ -1.01
CCDC40-208ENST00000572270 GALR1P47211 349 aa8.76□□□□□ -1.01
CCDC40-208ENST00000572270 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-208ENST00000572270 RHOBP62745 196 aa8.76□□□□□ -1.01
CCDC40-208ENST00000572270 LPCAT3Q6P1A2 487 aa8.76□□□□□ -1.01
CCDC40-208ENST00000572270 MGLLQ99685 303 aa8.76□□□□□ -1.01
CCDC40-208ENST00000572270 H7BYZ3 331 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 ATG12O94817 140 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 PMP2P02689 132 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 PRB4P10163 310 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-208ENST00000572270 LYZP61626 148 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 C10orf126Q8N4M7 172 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 OR5H2Q8NGV7 314 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 KRTAP9-2Q9BYQ4 174 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 C8orf4Q9NR00 106 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 DIABLOQ9NR28 239 aa8.75□□□□□ -1.01
CCDC40-208ENST00000572270 NXPH3O95157 252 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 IGKV1-5P01602 117 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 TAS2R46P59540 309 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 C2orf83Q53S99 150 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 SCXQ7RTU7 201 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 SPARTQ8N0X7 666 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 PACRGLQ8N7B6 248 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 ZNF738Q8NE65 137 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 AUNIPQ9H7T9 357 aa8.74□□□□□ -1.01
CCDC40-208ENST00000572270 HEYLQ9NQ87 328 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-208ENST00000572270 TRGV2A0A075B6R0 118 aa8.73□□□□□ -1.01
CCDC40-208ENST00000572270 A0A0A6YYH2 397 aa8.73□□□□□ -1.01
CCDC40-208ENST00000572270 A6NJ64 397 aa8.73□□□□□ -1.01
CCDC40-208ENST00000572270 PAX4O43316 350 aa8.73□□□□□ -1.01
CCDC40-208ENST00000572270 CRYGDP07320 174 aa8.73□□□□□ -1.01
CCDC40-208ENST00000572270 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-208ENST00000572270 C22orf42Q6IC83 251 aa8.73□□□□□ -1.01
CCDC40-208ENST00000572270 LYPD5Q6UWN5 251 aa8.73□□□□□ -1.01
CCDC40-208ENST00000572270 RNASE11Q8TAA1 199 aaKnown RBP8.73□□□□□ -1.01
CCDC40-208ENST00000572270 RRNAD1Q96FB5 475 aaKnown RBP8.73□□□□□ -1.01
CCDC40-208ENST00000572270 TRAV5A0A0B4J249 113 aa8.72□□□□□ -1.01
CCDC40-208ENST00000572270 ZFP92A6NM28 416 aa8.72□□□□□ -1.01
CCDC40-208ENST00000572270 FABP1P07148 127 aa8.72□□□□□ -1.01
CCDC40-208ENST00000572270 CDKN1BP46527 198 aa8.72□□□□□ -1.01
CCDC40-208ENST00000572270 SPCS3P61009 180 aa8.72□□□□□ -1.01
CCDC40-208ENST00000572270 LRTM2Q8N967 370 aa8.72□□□□□ -1.01
CCDC40-208ENST00000572270 RSG1Q9BU20 258 aa8.72□□□□□ -1.01
CCDC40-208ENST00000572270 SLC25A22Q9H936 323 aa8.72□□□□□ -1.01
CCDC40-208ENST00000572270 TRDV1A0A1B0GX56 115 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 RGS10O43665 173 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 TSPAN5P62079 268 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 IGFL4Q6B9Z1 124 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 Q6ZTI0 123 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 NOXA1Q86UR1 476 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 WFDC10BQ8IUB3 73 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 RNF182Q8N6D2 247 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 SLC25A38Q96DW6 304 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 C20orf144Q9BQM9 153 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 SLC25A32Q9H2D1 315 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 TPRKBQ9Y3C4 175 aa8.71□□□□□ -1.02
CCDC40-208ENST00000572270 SNRPGP15A8MWD9 76 aa8.7□□□□□ -1.02
CCDC40-208ENST00000572270 OR5AC1P0C628 307 aa8.7□□□□□ -1.02
CCDC40-208ENST00000572270 ZNF90Q03938 601 aa8.7□□□□□ -1.02
CCDC40-208ENST00000572270 FGL1Q08830 312 aa8.7□□□□□ -1.02
CCDC40-208ENST00000572270 KLF9Q13886 244 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-208ENST00000572270 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.7□□□□□ -1.02
CCDC40-208ENST00000572270 NDUFB11Q9NX14 153 aa8.7□□□□□ -1.02
CCDC40-208ENST00000572270 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-208ENST00000572270 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 HRH1P35367 487 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 SCAND1P57086 179 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 MRPL23Q16540 153 aaKnown RBP8.69□□□□□ -1.02
CCDC40-208ENST00000572270 PSG3Q16557 428 aa8.69□□□□□ -1.02
CCDC40-208ENST00000572270 TRIM16LQ309B1 348 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms