RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 CTSGP08311 255 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 NBEAP1P0C6P0 100 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 GP9P14770 177 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 PPIFP30405 207 aaKnown RBP4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 ADMP35318 185 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 MYCNOSP40205 109 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 BLCAPP62952 87 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 SUMO1P63165 101 aaKnown RBP4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 ATP5G2Q06055 141 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 ADIRFQ15847 76 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 C15orf32Q32M92 178 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 ZNF600Q6ZNG1 722 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 S100A7AQ86SG5 101 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 FAM223AQ8IWN6 122 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 TEX29Q8N6K0 151 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 WFDC11Q8NEX6 87 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 MS4A10Q96PG2 267 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 CTDSP1Q9GZU7 261 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 TMEM242Q9NWH2 141 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 PRELID1Q9Y255 219 aa4.78□□□□□ -1.64
TRAPPC1-204ENST00000571947 MAP1AP78559 2803 aaPredicted RBP4.78□□□□□ -1.65
TRAPPC1-204ENST00000571947 CXorf65A6NEN9 183 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 HELTA6NFD8 242 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 OR2T8A6NH00 312 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 ZNF98A6NK75 572 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 C9JCJ5 164 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 MT-ND4LP03901 98 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 TRGV3P03979 118 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 HIST1H1EP10412 219 aaKnown RBP4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 CRYBB3P26998 211 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 S100A7P31151 101 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 GPR183P32249 361 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 USF2Q15853 346 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 RNF212Q495C1 297 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 Q6ZS46 218 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 ZNF329Q86UD4 541 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 BPIFA4PQ86YQ2 179 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 CIARTQ8N365 385 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 TMEM190Q8WZ59 177 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 ANAPC16Q96DE5 110 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 ZNF414Q96IQ9 312 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 YPEL4Q96NS1 127 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 TCEAL7Q9BRU2 100 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 CHRDL1Q9BU40 450 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 DERL1Q9BUN8 251 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 ELOVL1Q9BW60 279 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 LINC00527Q9UJ94 153 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 VPREB3Q9UKI3 123 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 RNF24Q9Y225 148 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 LY96Q9Y6Y9 160 aa4.77□□□□□ -1.65
TRAPPC1-204ENST00000571947 FLNAP21333 2647 aaKnown RBP4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 ASH1LQ9NR48 2969 aaKnown RBP4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 TRBV20OR9-2A0A075B6H5 130 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 TMEM89A2RUT3 159 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 PGPA6NDG6 321 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 CLDN34H7C241 214 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 MRPS12O15235 138 aaKnown RBP4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 TGOLN2O43493 480 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 IGLV1-40P01703 118 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 CLEC3BP05452 202 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 FOLR2P14207 255 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 CD99P14209 185 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 RPL35P42766 123 aaKnown RBP4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 TPPP2P59282 170 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 TAS2R60P59551 318 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 RANP62826 216 aaKnown RBP4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 CFHR3Q02985 330 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 LEMD1Q68G75 181 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 TOMM20LQ6UXN7 152 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 CLEC19AQ6UXS0 136 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 LINC01551Q86U37 167 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 OR4F17Q8NGA8 305 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 OCC1Q8TAD7 63 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 C2CD4CQ8TF44 421 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 BLNKQ8WV28 456 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 HIST1H2BAQ96A08 127 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 USMG5Q96IX5 58 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 NOL4LQ96MY1 436 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 PRSS22Q9GZN4 317 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 Q9H3A6 140 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 ZFAND3Q9H8U3 227 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 ZNF586Q9NXT0 402 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 RABAC1Q9UI14 185 aa4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 GCN1Q92616 2671 aaKnown RBP4.76□□□□□ -1.65
TRAPPC1-204ENST00000571947 ZANQ9Y493 2812 aa4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 PGPEP1LA6NFU8 196 aa4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 H7BYZ3 331 aa4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 BMPR1BO00238 502 aa4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 PEX7O00628 323 aa4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 PPP1R2P9O14990 202 aa4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 SMAD7O15105 426 aaKnown RBP4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 HOXA3O43365 443 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 CD5LO43866 347 aa4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 SLC25A5P05141 298 aaKnown RBP4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 S100A9P06702 114 aaKnown RBP4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 IGLC2P0DOY2 106 aa4.75□□□□□ -1.65
TRAPPC1-204ENST00000571947 PF4V1P10720 104 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms