RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 DEFB4AO15263 64 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 IFNA21P01568 189 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 GIG44P09565 113 aaPredicted RBP7.07□□□□□ -1.28
CIITA-207ENST00000571545 IAPPP10997 89 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 AKR1C1Q04828 323 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 PPP1R1AQ13522 171 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 CNPY1Q3B7I2 92 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 EBLN2Q6P2I7 272 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 CCDC190Q86UF4 302 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 THAP8Q8NA92 274 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 CSNK1G2-AS1Q8NCQ2 148 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 BPIFCQ8NFQ6 507 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 OR4D5Q8NGN0 318 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 NEU1Q99519 415 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 STRAPQ9Y3F4 350 aaKnown RBP7.07□□□□□ -1.28
CIITA-207ENST00000571545 X6R8D5 127 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 IGKV1D-37A0A075B6S9 117 aa7.06□□□□□ -1.28
CIITA-207ENST00000571545 IGLL5B9A064 214 aa7.06□□□□□ -1.28
CIITA-207ENST00000571545 ZNF90Q03938 601 aa7.06□□□□□ -1.28
CIITA-207ENST00000571545 OR1B1Q8NGR6 318 aa7.06□□□□□ -1.28
CIITA-207ENST00000571545 C7orf50Q9BRJ6 194 aaKnown RBP7.06□□□□□ -1.28
CIITA-207ENST00000571545 RNF126Q9BV68 326 aa7.06□□□□□ -1.28
CIITA-207ENST00000571545 TMEM147Q9BVK8 224 aa7.06□□□□□ -1.28
CIITA-207ENST00000571545 SAV1Q9H4B6 383 aaPredicted RBP7.06□□□□□ -1.28
CIITA-207ENST00000571545 RPRMQ9NS64 109 aa7.06□□□□□ -1.28
CIITA-207ENST00000571545 CLEC5AQ9NY25 188 aa7.06□□□□□ -1.28
CIITA-207ENST00000571545 NDUFB6O95139 128 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 AMBPP02760 352 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 HOXB5P09067 269 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 RBMY1A1P0DJD3 496 aaKnown RBP7.05□□□□□ -1.28
CIITA-207ENST00000571545 RBMY1CP0DJD4 496 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 HLA-DMBP28068 263 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 PAX9P55771 341 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 SELENOTP62341 195 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 RBMY1FQ15415 496 aaKnown RBP7.05□□□□□ -1.28
CIITA-207ENST00000571545 SPANXN5Q5MJ07 72 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 ZNF705AQ6ZN79 300 aaPredicted RBP7.05□□□□□ -1.28
CIITA-207ENST00000571545 LINC00052Q96N35 136 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 SRRQ9GZT4 340 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 XCL2Q9UBD3 114 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 GOLT1BQ9Y3E0 138 aa7.05□□□□□ -1.28
CIITA-207ENST00000571545 IGHV4-4A0A075B6R2 117 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 C9orf170A2RU37 121 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 ZNF705FA8MVS1 300 aaPredicted RBP7.04□□□□□ -1.28
CIITA-207ENST00000571545 FNDC10F2Z333 226 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 SOCS3O14543 225 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 ZNF705DP0CH99 300 aaPredicted RBP7.04□□□□□ -1.28
CIITA-207ENST00000571545 ZNF705BP0CI00 300 aaPredicted RBP7.04□□□□□ -1.28
CIITA-207ENST00000571545 SPART-AS1P0CW21 52 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 RAP2BP61225 183 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 OR2F1Q13607 317 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 Q6ZTC4 211 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 ACOT7LQ6ZUV0 252 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 TMEM144Q7Z5S9 345 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 C16orf92Q96LL3 132 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 NDUFAF3Q9BU61 184 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 MAGT1Q9H0U3 335 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 RBM38Q9H0Z9 239 aaKnown RBP7.04□□□□□ -1.28
CIITA-207ENST00000571545 RFNGQ9Y644 331 aa7.04□□□□□ -1.28
CIITA-207ENST00000571545 IGKV1OR2-108A0A075B7D4 117 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 ELOA3CA0A087WX78 387 aaPredicted RBP7.03□□□□□ -1.28
CIITA-207ENST00000571545 DEFB131BA0A096LNP1 70 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 SMCO3A2RU48 225 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 ZNF98A6NK75 572 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 PRSS46E5RG02 174 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 HBE1P02100 147 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 P0DMU3 169 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 FAM231AP0DMU4 169 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 FAM231CP0DMU5 169 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 RPL7P18124 248 aaKnown RBP7.03□□□□□ -1.28
CIITA-207ENST00000571545 PSG9Q00887 426 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 ID3Q02535 119 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 C4orf46Q504U0 113 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 RPP25LQ8N5L8 163 aaKnown RBP7.03□□□□□ -1.28
CIITA-207ENST00000571545 OR10P1Q8NGE3 313 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 OR4B1Q8NGF8 309 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 FAM210BQ96KR6 192 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 WDR12Q9GZL7 423 aaKnown RBP7.03□□□□□ -1.28
CIITA-207ENST00000571545 SLC25A22Q9H936 323 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 PSENENQ9NZ42 101 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 DOK5Q9P104 306 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 MGAT4CQ9UBM8 478 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 APLNQ9ULZ1 77 aa7.03□□□□□ -1.28
CIITA-207ENST00000571545 A0A0J9YX75 114 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 H3BP45 60 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 SSSCA1O60232 199 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 TSC22D2O75157 780 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 DEDDO75618 318 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 DUSP14O95147 198 aaKnown RBP7.02□□□□□ -1.29
CIITA-207ENST00000571545 IL5P05113 134 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 OR4E1P0C645 316 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 ORM2P19652 201 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 TAS2R30P59541 319 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 B2MP61769 119 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 DLK1P80370 383 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 PXDC1Q5TGL8 231 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 CYP2G1PQ6ZSU1 146 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 SMIM8Q96KF7 97 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 SLC25A32Q9H2D1 315 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 HIGD1AQ9Y241 93 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms