RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 NBL1P41271 181 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 RIGQ13278 110 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 TEX45Q8NA69 505 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 OR9G4Q8NGQ1 327 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 PRSS3P2Q8NHM4 247 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 SPOCK3Q9BQ16 436 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 RABAC1Q9UI14 185 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 PIEZO1Q92508 2521 aa12.39□□□□□ -0.43
SMG6-207ENST00000570756 AHCTF1Q8WYP5 2266 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 IGHV1-18A0A0C4DH31 117 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 A0A0G2JLM5 398 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 A0A1B0GW15 77 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 ACP1P24666 158 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 GUSBP1Q15486 140 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 NEGR1Q7Z3B1 354 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 ZC2HC1AQ96GY0 325 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 Q9H3A6 140 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 C9orf172C9J069 976 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 CD59P13987 128 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 WT1-ASQ06250 92 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 ZNF833PQ6ZTB9 187 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 Q86TA4 180 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 FAM222BQ8WU58 562 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 JMJD8Q96S16 334 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 JKAMPQ9P055 326 aa12.38□□□□□ -0.43
SMG6-207ENST00000570756 SIVA1O15304 175 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 IGHV3-48P01763 117 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 CEACAM3P40198 252 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 BOD1L2Q8IYS8 172 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 RPRMLQ8N4K4 120 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 TMEM167AQ8TBQ9 72 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 FLYWCH2Q96CP2 140 aaKnown RBP12.37□□□□□ -0.43
SMG6-207ENST00000570756 HEATR1Q9H583 2144 aaKnown RBP12.37□□□□□ -0.43
SMG6-207ENST00000570756 CEP295Q9C0D2 2601 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 A1L4Q6 167 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 SMIM17P0DL12 118 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 NHLH1Q02575 133 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 TMEM178AQ8NBL3 297 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 OR4X2Q8NGF9 303 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 OR10X1Q8NGY0 326 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 FER1L6-AS2Q96M78 137 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 MRPL20Q9BYC9 149 aaKnown RBP12.37□□□□□ -0.43
SMG6-207ENST00000570756 MED13Q9UHV7 2174 aa12.37□□□□□ -0.43
SMG6-207ENST00000570756 NBEAQ8NFP9 2946 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 DYSFO75923 2080 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 DSCAMO60469 2012 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 NCR2O95944 276 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 GP9P14770 177 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 GATD1Q8NB37 220 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 E7EUB6 86 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 SMAD7O15105 426 aaKnown RBP12.36□□□□□ -0.43
SMG6-207ENST00000570756 FOXE3Q13461 319 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 LGALS9BQ3B8N2 356 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 LGALS9CQ6DKI2 356 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 TRGV9Q99603 122 aa12.36□□□□□ -0.43
SMG6-207ENST00000570756 LOC400499M0QZD8 3231 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 PRR14LQ5THK1 2151 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 KIR2DL2P43627 348 aaPredicted RBP12.35□□□□□ -0.43
SMG6-207ENST00000570756 FAM201AQ5SY85 155 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 TMEM164Q5U3C3 297 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 C16orf54Q6UWD8 224 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 OR4C13Q8NGP0 309 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 MRPL36Q9P0J6 103 aaKnown RBP12.35□□□□□ -0.43
SMG6-207ENST00000570756 COL27A1Q8IZC6 1860 aaPredicted RBP12.35□□□□□ -0.43
SMG6-207ENST00000570756 SPRY3O43610 288 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 SPRNQ5BIV9 151 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 DUX4L9Q6RFH8 374 aaPredicted RBP12.35□□□□□ -0.43
SMG6-207ENST00000570756 CIARTQ8N365 385 aaPredicted RBP12.35□□□□□ -0.43
SMG6-207ENST00000570756 OR8A1Q8NGG7 326 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 ZNRD1Q9P1U0 126 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 RNF7Q9UBF6 113 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 SPCS1Q9Y6A9 102 aa12.35□□□□□ -0.43
SMG6-207ENST00000570756 A0A1W2PPM0 123 aa12.34□□□□□ -0.43
SMG6-207ENST00000570756 hADV38S2A0JD32 116 aa12.34□□□□□ -0.43
SMG6-207ENST00000570756 RBPJQ06330 500 aa12.34□□□□□ -0.43
SMG6-207ENST00000570756 TMEM190Q8WZ59 177 aa12.34□□□□□ -0.43
SMG6-207ENST00000570756 GAFA1Q96PS6 74 aa12.34□□□□□ -0.43
SMG6-207ENST00000570756 APOBEC3AP31941 199 aaPredicted RBP12.33□□□□□ -0.43
SMG6-207ENST00000570756 Q6AWC8 147 aa12.33□□□□□ -0.43
SMG6-207ENST00000570756 ZADH2Q8N4Q0 377 aa12.33□□□□□ -0.43
SMG6-207ENST00000570756 FAM169BQ8N8A8 192 aa12.33□□□□□ -0.43
SMG6-207ENST00000570756 THYN1Q9P016 225 aa12.33□□□□□ -0.43
SMG6-207ENST00000570756 HILPDAQ9Y5L2 63 aa12.33□□□□□ -0.43
SMG6-207ENST00000570756 URB1O60287 2271 aaKnown RBP12.33□□□□□ -0.44
SMG6-207ENST00000570756 TRBV6-1A0A0K0K1D8 114 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 CGB1A6NKQ9 187 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 C22orf46C9J442 243 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 ARMS2P0C7Q2 107 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 FABP2P12104 132 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 GATA4P43694 442 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 PLP1P60201 277 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 MSMPQ1L6U9 139 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 CLEC2AQ6UVW9 174 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 BHLHA15Q7RTS1 189 aaPredicted RBP12.33□□□□□ -0.44
SMG6-207ENST00000570756 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 C8orf46Q8TAG6 207 aa12.33□□□□□ -0.44
SMG6-207ENST00000570756 SRSF12Q8WXF0 261 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms