RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 NEU1Q99519 415 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 WDR12Q9GZL7 423 aaKnown RBP12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 MAGT1Q9H0U3 335 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 SAV1Q9H4B6 383 aaPredicted RBP12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 STRAPQ9Y3F4 350 aaKnown RBP12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 DNAH6Q9C0G6 4158 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 CENPXA8MT69 81 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 DEFB4AO15263 64 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 ADAP1O75689 374 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 OR4E1P0C645 316 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 PAX9P55771 341 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 ZNF705AQ6ZN79 300 aaPredicted RBP12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 TMEM144Q7Z5S9 345 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 C2CD4CQ8TF44 421 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 GPR82Q96P67 336 aa12.35□□□□□ -0.43
MAP1LC3B-208ENST00000570189 ELOA3CA0A087WX78 387 aaPredicted RBP12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 FNDC10F2Z333 226 aa12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 IFNA21P01568 189 aa12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 S100A7P31151 101 aa12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 SPANXN5Q5MJ07 72 aa12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 BPIFCQ8NFQ6 507 aa12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 SMIM8Q96KF7 97 aa12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 NDUFA13Q9P0J0 144 aa12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
MAP1LC3B-208ENST00000570189 FRAS1Q86XX4 4008 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 PMS2P5A8MQ11 134 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 A8MTW9 85 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 IL7P13232 177 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 OR2F1Q13607 317 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 ACOT7LQ6ZUV0 252 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 OR8I2Q8N0Y5 310 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 CLEC5AQ9NY25 188 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 FLVCR2Q9UPI3 526 aa12.33□□□□□ -0.44
MAP1LC3B-208ENST00000570189 ZNF98A6NK75 572 aa12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 ZNF705FA8MVS1 300 aaPredicted RBP12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 ZNF705DP0CH99 300 aaPredicted RBP12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 ZNF705BP0CI00 300 aaPredicted RBP12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 GALR1P47211 349 aa12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 TAS2R30P59541 319 aa12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 PLP1P60201 277 aa12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 GDF5OSQ5U4N7 250 aa12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 MITD1Q8WV92 249 aa12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 C17orf77Q96MU5 243 aa12.32□□□□□ -0.44
MAP1LC3B-208ENST00000570189 SMIM9A6NGZ8 99 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 H3BP45 60 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 K7EPK0 472 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 HLA-DMBP28068 263 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 DLK1P80370 383 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 AKR1C1Q04828 323 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 TMEM14EPQ6UXP3 125 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 ZNF709Q8N972 641 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 OR1B1Q8NGR6 318 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 PPP1R14BQ96C90 147 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 SLC25A32Q9H2D1 315 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 PSENENQ9NZ42 101 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 XCL2Q9UBD3 114 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 APLNQ9ULZ1 77 aa12.31□□□□□ -0.44
MAP1LC3B-208ENST00000570189 TRAV10A0A0B4J240 114 aa12.3□□□□□ -0.44
MAP1LC3B-208ENST00000570189 A0A0J9YX75 114 aa12.3□□□□□ -0.44
MAP1LC3B-208ENST00000570189 TSC22D2O75157 780 aa12.3□□□□□ -0.44
MAP1LC3B-208ENST00000570189 ANXA7P20073 488 aaKnown RBP12.3□□□□□ -0.44
MAP1LC3B-208ENST00000570189 SELENOTP62341 195 aa12.3□□□□□ -0.44
MAP1LC3B-208ENST00000570189 C4orf46Q504U0 113 aa12.3□□□□□ -0.44
MAP1LC3B-208ENST00000570189 TMEM182Q6ZP80 229 aaPredicted RBP12.3□□□□□ -0.44
MAP1LC3B-208ENST00000570189 RPRMQ9NS64 109 aa12.3□□□□□ -0.44
MAP1LC3B-208ENST00000570189 TMEM189A5PLL7 270 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 H3BRN7 92 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 PLA2G10O15496 165 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 SSSCA1O60232 199 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 LINC00299Q6ZSB3 139 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 CYP2G1PQ6ZSU1 146 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 Q6ZTC4 211 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 LINC00052Q96N35 136 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 TMEM147Q9BVK8 224 aa12.29□□□□□ -0.44
MAP1LC3B-208ENST00000570189 GATA2P23769 480 aaPredicted RBP12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 IAH1Q2TAA2 248 aaPredicted RBP12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 ZBTB8BQ8NAP8 495 aaPredicted RBP12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 RNF126Q9BV68 326 aa12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 GGACTQ9BVM4 153 aa12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 C20orf85Q9H1P6 137 aa12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 RCL1Q9Y2P8 373 aaKnown RBP12.28□□□□□ -0.44
MAP1LC3B-208ENST00000570189 LYRM1O43325 122 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 AMBPP02760 352 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 ORM2P19652 201 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 PSG9Q00887 426 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 C12orf74Q32Q52 190 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 EBLN2Q6P2I7 272 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 S100A7AQ86SG5 101 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 RPP25LQ8N5L8 163 aaKnown RBP12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 C16orf92Q96LL3 132 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 SLC25A39Q9BZJ4 359 aaPredicted RBP12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 CELA1Q9UNI1 258 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 RNF24Q9Y225 148 aa12.27□□□□□ -0.45
MAP1LC3B-208ENST00000570189 TEX48A0A1B0GUV7 120 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 LINC00854A0A1B0GVQ3 168 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms