RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 ERVFC1-1P60608 527 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 YPEL3P61236 119 aaPredicted RBP4.57□□□□□ -1.68
CDH13-213ENST00000569454 EBI3Q14213 229 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 C5orf64Q2M2E5 130 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 RASL11AQ6T310 242 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 FAM231DQ6ZW35 169 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 LINC00305Q7Z4B0 112 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 C5orf17Q8NAS9 161 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 NECAP1Q8NC96 275 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 CFHR4Q92496 578 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 ZNF503Q96F45 646 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 ELOVL1Q9BW60 279 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 FBXL15Q9H469 300 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 LPAR2Q9HBW0 351 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 TMEM14CQ9P0S9 112 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 HIGD1AQ9Y241 93 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 CSMD2Q7Z408 3487 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 CENPEQ02224 2701 aa4.57□□□□□ -1.68
CDH13-213ENST00000569454 YLPM1P49750 1951 aaKnown RBP4.56□□□□□ -1.68
CDH13-213ENST00000569454 ROS1P08922 2347 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 IGHV2-70DA0A0C4DH43 119 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 I3L2K1 104 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 FOXH1O75593 365 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 GCGP01275 180 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 IGLC1P0CG04 106 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 HIST1H1EP10412 219 aaKnown RBP4.56□□□□□ -1.68
CDH13-213ENST00000569454 HIST1H1BP16401 226 aaKnown RBP4.56□□□□□ -1.68
CDH13-213ENST00000569454 GATA2P23769 480 aaPredicted RBP4.56□□□□□ -1.68
CDH13-213ENST00000569454 CRYBB3P26998 211 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 UBE2E1P51965 193 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 UBE2G1P62253 170 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 ARF6P62330 175 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 SUMO1P63165 101 aaKnown RBP4.56□□□□□ -1.68
CDH13-213ENST00000569454 ZNF90Q03938 601 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 CT83Q5H943 113 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 FAM209BQ5JX69 171 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 HCP5Q6MZN7 132 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 ZNF562Q6V9R5 426 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 VMO1Q7Z5L0 202 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 LYPD1Q8N2G4 141 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 OR5T1Q8NG75 326 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 OR1B1Q8NGR6 318 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 OCC1Q8TAD7 63 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 ITLN2Q8WWU7 325 aaPredicted RBP4.56□□□□□ -1.68
CDH13-213ENST00000569454 ARPC1AQ92747 370 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 TMEM18Q96B42 140 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 FXYD5Q96DB9 178 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 FMC1Q96HJ9 113 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 IGF2BP2-AS1Q96M15 143 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 MDFIQ99750 246 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 ATG101Q9BSB4 218 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 GNB1LQ9BYB4 327 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 NIT2Q9NQR4 276 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 TRAPPC1Q9Y5R8 145 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 SOX21Q9Y651 276 aaPredicted RBP4.56□□□□□ -1.68
CDH13-213ENST00000569454 TNCP24821 2201 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 HYDINQ4G0P3 5121 aa4.56□□□□□ -1.68
CDH13-213ENST00000569454 MALRD1Q5VYJ5 2156 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 TRBV6-1A0A0K0K1D8 114 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 SERTM2A0A1B0GWG4 89 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 FBLL1A6NHQ2 334 aaKnown RBP4.55□□□□□ -1.68
CDH13-213ENST00000569454 K7EN84 100 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 K7EQM0 130 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 TOMM40O96008 361 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 HLA-DQA1P01909 254 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 REG1AP05451 166 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 NBEAP1P0C6P0 100 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 FAM106CPP0CH98 169 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 RD3LP0DJH9 198 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 GP9P14770 177 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 ORM2P19652 201 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 CNTFRP26992 372 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 FCGR2BP31994 310 aaPredicted RBP4.55□□□□□ -1.68
CDH13-213ENST00000569454 MYCNOSP40205 109 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 RAB9AP51151 201 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 MFAP2P55001 183 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 RPL15P61313 204 aaKnown RBP4.55□□□□□ -1.68
CDH13-213ENST00000569454 CX3CL1P78423 397 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 SSBP2P81877 361 aaPredicted RBP4.55□□□□□ -1.68
CDH13-213ENST00000569454 PDE6HQ13956 83 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 HES1Q14469 280 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 FXYD3Q14802 87 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 CDSNQ15517 529 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 MLANAQ16655 118 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 TMEM183BQ1AE95 376 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 IBA57Q5T440 356 aaKnown RBP4.55□□□□□ -1.68
CDH13-213ENST00000569454 PATE2Q6UY27 113 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 ZNF329Q86UD4 541 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 BPIFA4PQ86YQ2 179 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 Q8N6K4 173 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 OR4F17Q8NGA8 305 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 OR5R1Q8NH85 324 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 RITA1Q96K30 269 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 PACRGQ96M98 296 aaPredicted RBP4.55□□□□□ -1.68
CDH13-213ENST00000569454 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 WNT10AQ9GZT5 417 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 SIRPDQ9H106 197 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 UBTD1Q9HAC8 227 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 OTORQ9NRC9 128 aa4.55□□□□□ -1.68
CDH13-213ENST00000569454 EPDR1Q9UM22 224 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms