RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 ENKURQ8TC29 256 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 ZNF414Q96IQ9 312 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 TM2D3Q9BRN9 247 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 SRD5A3Q9H8P0 318 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 GPN1Q9HCN4 374 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-219ENST00000569136 PSENENQ9NZ42 101 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 TBC1D24Q9ULP9 559 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
CAPN3-219ENST00000569136 RBMY1BA6NDE4 496 aaKnown RBP6.84□□□□□ -1.31
CAPN3-219ENST00000569136 C5orf51A6NDU8 294 aa6.84□□□□□ -1.31
CAPN3-219ENST00000569136 RBMY1EA6NEQ0 496 aaKnown RBP6.84□□□□□ -1.31
CAPN3-219ENST00000569136 UBE2CO00762 179 aa6.84□□□□□ -1.31
CAPN3-219ENST00000569136 HNRNPCP07910 306 aaKnown RBP eCLIP6.84□□□□□ -1.31
CAPN3-219ENST00000569136 RBMY1DP0C7P1 496 aaKnown RBP6.84□□□□□ -1.31
CAPN3-219ENST00000569136 PSG1P11464 419 aa6.84□□□□□ -1.31
CAPN3-219ENST00000569136 POLR2GP62487 172 aaKnown RBP eCLIP6.84□□□□□ -1.31
CAPN3-219ENST00000569136 ZBTB8BQ8NAP8 495 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-219ENST00000569136 RCHY1Q96PM5 261 aa6.84□□□□□ -1.31
CAPN3-219ENST00000569136 TRGV9Q99603 122 aa6.84□□□□□ -1.31
CAPN3-219ENST00000569136 SEPSECSQ9HD40 501 aaKnown RBP6.84□□□□□ -1.31
CAPN3-219ENST00000569136 TRGV11A0A075B6L2 103 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 IGHV3OR16-13A0A075B7E8 117 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 LOC102724200A0A096LPH7 203 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-219ENST00000569136 IGHV3-49A0A0A0MS15 119 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 IGHV3-74A0A0B4J1X5 117 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 KIR2DL5BA0A0G2JN68 375 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 KIR2DL5BA0A0G2JPC4 375 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 FAM25EA8MYX2 175 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 FNDC10F2Z333 226 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 PRAF2O60831 178 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 TSC22D2O75157 780 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 APOHP02749 345 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-219ENST00000569136 IL4P05112 153 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 P2RY1P47900 373 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 FHL2Q14192 279 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 C1orf194Q5T5A4 169 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 OR8G2PQ6IF36 304 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 C11orf87Q6NUJ2 197 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 TMEM144Q7Z5S9 345 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 S100A7AQ86SG5 101 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 KIR2DL5AQ8N109 375 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 THAP8Q8NA92 274 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 OR10P1Q8NGE3 313 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 KIR2DL5BQ8NHK3 375 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 C2orf50Q96LR7 162 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 GGACTQ9BVM4 153 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 GGTLC1Q9BX51 225 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 MS4A6AQ9H2W1 248 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 RABAC1Q9UI14 185 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 SELENOKQ9Y6D0 94 aa6.83□□□□□ -1.32
CAPN3-219ENST00000569136 DNAH9Q9NYC9 4486 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 PRSS29PA6NIE9 313 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 MPTX1A8MV57 137 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 INMT-MINDY4F8WBC2 141 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 L7N2F9 121 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 SSSCA1O60232 199 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 DEDDO75618 318 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 MBPP02686 304 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-219ENST00000569136 PVALBP20472 110 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-219ENST00000569136 APOC4P55056 127 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 VAMP2P63027 116 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 CYCSP99999 105 aaKnown RBP6.82□□□□□ -1.32
CAPN3-219ENST00000569136 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 GSG1LQ6UXU4 331 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 RNF125Q96EQ8 232 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 SEC22CQ9BRL7 303 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 MARVELD1Q9BSK0 173 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 TMPRSS5Q9H3S3 457 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 NPVFQ9HCQ7 196 aa6.82□□□□□ -1.32
CAPN3-219ENST00000569136 IGKV1D-37A0A075B6S9 117 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 IGHV3-66A0A0C4DH42 116 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 PRSS46E5RG02 174 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 C3orf84H3BNL1 204 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 BUB3O43684 328 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 PAX9P55771 341 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 SELENOTP62341 195 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 DLK1P80370 383 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 IFITM3Q01628 133 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 ZNF90Q03938 601 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 TMEM14EPQ6UXP3 125 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 Q6ZWC4 215 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 NRARPQ7Z6K4 114 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 GBGT1Q8N5D6 347 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 BPIFCQ8NFQ6 507 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 FBXL17Q9UF56 701 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 RNF24Q9Y225 148 aa6.81□□□□□ -1.32
CAPN3-219ENST00000569136 IGKV3-7A0A075B6H7 116 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 C7orf66A4D0T2 115 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 RLN2P04090 185 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 TFPI2P48307 235 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 SNRPD3P62318 126 aaKnown RBP6.8□□□□□ -1.32
CAPN3-219ENST00000569136 COL7A1Q02388 2944 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 AKR1C1Q04828 323 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 IL15RAQ13261 267 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 RAB31Q13636 194 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 USF2Q15853 346 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-219ENST00000569136 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 SAMD13Q5VXD3 122 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 GLMPQ8WWB7 406 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms