RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TMEM212A6NML5 194 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 FNDC10F2Z333 226 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 H3BUT2 72 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 SYNGR1O43759 233 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 REM1O75628 298 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 HLA-DQB2P05538 268 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 CRYGDP07320 174 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 LINC00032P0C843 101 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 EVI2AP22794 236 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 RPL12P30050 165 aaKnown RBP3.56□□□□□ -1.84
UBR1-208ENST00000569066 RBM11P57052 281 aaKnown RBP3.56□□□□□ -1.84
UBR1-208ENST00000569066 CCL20P78556 96 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 ADIRFQ15847 76 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 FAM27D1Q5T7N8 215 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 ZFAND6Q6FIF0 208 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 SHISA6Q6ZSJ9 500 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 WDR86Q86TI4 376 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 ZNF439Q8NDP4 499 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 AQP3Q92482 292 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 CARD19Q96LW7 228 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 OR4C12Q96R67 309 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 LINC01587Q99440 93 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 SMDT1Q9H4I9 107 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 PLEKHF2Q9H8W4 249 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 CES1P1Q9UKY3 287 aa3.56□□□□□ -1.84
UBR1-208ENST00000569066 SCN11AQ9UI33 1791 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 ARFGEF2Q9Y6D5 1785 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 PKD1L3Q7Z443 1732 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 ADAMTSL3P82987 1691 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 IGKV6D-21A0A0A0MT36 114 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 A0A1B0GV50 99 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 J3KT08 172 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 HLA-AP01891 365 aaKnown RBP3.55□□□□□ -1.84
UBR1-208ENST00000569066 APOC2P02655 101 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 APCSP02743 223 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 LINC00869P0C866 280 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 BLVRBP30043 206 aaPredicted RBP3.55□□□□□ -1.84
UBR1-208ENST00000569066 EMP1P54849 157 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 SNRPGP62308 76 aaKnown RBP3.55□□□□□ -1.84
UBR1-208ENST00000569066 WFDC2Q14508 124 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 TMEM97Q5BJF2 176 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 ZNF695Q8IW36 515 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 OR10AG1Q8NH19 301 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 ZNRF2Q8NHG8 242 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 DERL3Q96Q80 235 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 ST20Q9HBF5 79 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 POLR1DQ9Y2S0 133 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 SPCS1Q9Y6A9 102 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 PDCD11Q14690 1871 aaKnown RBP3.55□□□□□ -1.84
UBR1-208ENST00000569066 IGLV1-50A0A075B6I6 118 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 hADV38S2A0JD32 116 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 GRIFINA4D1Z8 144 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 RBFOX3A6NFN3 312 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 A8MT66 165 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 IGLC6P0CF74 106 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 LIMS3P0CW19 117 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 LIMS4P0CW20 117 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 PPIBP23284 216 aaKnown RBP3.55□□□□□ -1.84
UBR1-208ENST00000569066 ZNF93P35789 620 aaPredicted RBP3.55□□□□□ -1.84
UBR1-208ENST00000569066 GALR1P47211 349 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 SLC35B1P78383 322 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 KLRD1Q13241 179 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 CLEC12BQ2HXU8 276 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 SBSNQ6UWP8 590 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 TEX29Q8N6K0 151 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 OR2M3Q8NG83 312 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 OR4C16Q8NGL9 310 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 VSTM2AQ8TAG5 236 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 DOK4Q8TEW6 326 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 TWIST2Q8WVJ9 160 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 KCNS1Q96KK3 526 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 C18orf15Q96N68 181 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 PRTFDC1Q9NRG1 225 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 ZNF355PQ9NSJ1 428 aa3.55□□□□□ -1.84
UBR1-208ENST00000569066 MCTS1Q9ULC4 181 aaKnown RBP3.55□□□□□ -1.84
UBR1-208ENST00000569066 NUMA1Q14980 2115 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 XIRP1Q702N8 1843 aaKnown RBP3.54□□□□□ -1.84
UBR1-208ENST00000569066 DUXBA0A1W2PPF3 345 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 DPRXA6NFQ7 191 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 CD34P28906 385 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 PRSS3P35030 304 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 MSMO1Q15800 293 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 ETDBQ3ZM63 59 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 Q5XG85 94 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 FAM19A1Q7Z5A9 133 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 OR5D14Q8NGL3 314 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 SYNPRQ8TBG9 265 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 CIRBP-AS1Q8TBR5 109 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 RTN4IP1Q8WWV3 396 aaPredicted RBP3.54□□□□□ -1.84
UBR1-208ENST00000569066 S100A16Q96FQ6 103 aaKnown RBP3.54□□□□□ -1.84
UBR1-208ENST00000569066 AQP10Q96PS8 301 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 OR2H1Q9GZK4 316 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 C8orf17Q9NRJ1 99 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 SPANXA1Q9NS26 97 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 TVP23BQ9NYZ1 205 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 PRNDQ9UKY0 176 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 MIA3Q5JRA6 1907 aa3.54□□□□□ -1.84
UBR1-208ENST00000569066 SIPA1L3O60292 1781 aaPredicted RBP3.54□□□□□ -1.84
UBR1-208ENST00000569066 UBR1Q8IWV7 1749 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms