RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TIGITQ495A1 244 aa10.68□□□□□ -0.7
CMTM3-215ENST00000568477 OR1S2Q8NGQ3 325 aa10.68□□□□□ -0.7
CMTM3-215ENST00000568477 NARS2Q96I59 477 aaKnown RBP10.68□□□□□ -0.7
CMTM3-215ENST00000568477 ARPC5LQ9BPX5 153 aa10.68□□□□□ -0.7
CMTM3-215ENST00000568477 MAP6D1Q9H9H5 199 aa10.68□□□□□ -0.7
CMTM3-215ENST00000568477 TRAV2A0A0B4J234 112 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 DFFBO76075 338 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 PVALBP20472 110 aaPredicted RBP10.67□□□□□ -0.7
CMTM3-215ENST00000568477 RPL11P62913 178 aaKnown RBP10.67□□□□□ -0.7
CMTM3-215ENST00000568477 TNFRSF9Q07011 255 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 ETFRF1Q6IPR1 90 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 WFDC3Q8IUB2 231 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 LILRB2Q8N423 598 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 MS4A6AQ9H2W1 248 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 C11orf1Q9H5F2 150 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 HSPB7Q9UBY9 170 aa10.67□□□□□ -0.7
CMTM3-215ENST00000568477 FAM90A26D6RGX4 464 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 CFDP00746 253 aaPredicted RBP10.66□□□□□ -0.7
CMTM3-215ENST00000568477 IFNA10P01566 189 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 IGLC1P0CG04 106 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 CRYBB3P26998 211 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 RPL12P30050 165 aaKnown RBP10.66□□□□□ -0.7
CMTM3-215ENST00000568477 OR10J1P30954 320 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 ZNF124Q15973 351 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 DTD1Q8TEA8 209 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 TMEM170AQ8WVE7 144 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 RNF183Q96D59 192 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 PHYHIPLQ96FC7 376 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 RABAC1Q9UI14 185 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 RCL1Q9Y2P8 373 aaKnown RBP10.66□□□□□ -0.7
CMTM3-215ENST00000568477 SACSQ9NZJ4 4579 aa10.66□□□□□ -0.7
CMTM3-215ENST00000568477 JTBO76095 146 aa10.65□□□□□ -0.7
CMTM3-215ENST00000568477 YPEL3P61236 119 aaPredicted RBP10.65□□□□□ -0.7
CMTM3-215ENST00000568477 EIF5AP63241 154 aaKnown RBP10.65□□□□□ -0.7
CMTM3-215ENST00000568477 STOML3Q8TAV4 291 aa10.65□□□□□ -0.7
CMTM3-215ENST00000568477 Q8WTZ3 238 aa10.65□□□□□ -0.7
CMTM3-215ENST00000568477 ACY3Q96HD9 319 aa10.65□□□□□ -0.7
CMTM3-215ENST00000568477 GRAMD2BQ96HH9 432 aa10.65□□□□□ -0.7
CMTM3-215ENST00000568477 ZNF471Q9BX82 626 aaPredicted RBP10.65□□□□□ -0.7
CMTM3-215ENST00000568477 RBKSQ9H477 322 aa10.65□□□□□ -0.7
CMTM3-215ENST00000568477 A0A0J9YWU9 116 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 WRBO00258 174 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 DEFB131AP59861 70 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 RAB14P61106 215 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 POLR2GP62487 172 aaKnown RBP eCLIP10.64□□□□□ -0.71
CMTM3-215ENST00000568477 VAMP2P63027 116 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 CLLU1Q5K131 121 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 STXBP6Q8NFX7 210 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 NPIPB3Q92617 1050 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 RAB40CQ96S21 281 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 CSTL1Q9H114 145 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 CYTL1Q9NRR1 136 aa10.64□□□□□ -0.71
CMTM3-215ENST00000568477 ATP6V1G1O75348 118 aa10.63□□□□□ -0.71
CMTM3-215ENST00000568477 IFNA4P05014 189 aa10.63□□□□□ -0.71
CMTM3-215ENST00000568477 TPT1P13693 172 aaKnown RBP10.63□□□□□ -0.71
CMTM3-215ENST00000568477 ATP5IP56385 69 aaPredicted RBP10.63□□□□□ -0.71
CMTM3-215ENST00000568477 TAS2R30P59541 319 aa10.63□□□□□ -0.71
CMTM3-215ENST00000568477 FAM24BQ8N5W8 94 aa10.63□□□□□ -0.71
CMTM3-215ENST00000568477 SLC25A31Q9H0C2 315 aa10.63□□□□□ -0.71
CMTM3-215ENST00000568477 LYSTQ99698 3801 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 CXorf65A6NEN9 183 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 SSSCA1O60232 199 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 MED6O75586 246 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 LEMD1Q68G75 181 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 TMEM217Q8N7C4 229 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 GATAD1Q8WUU5 269 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 MAGT1Q9H0U3 335 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 LYRM2Q9NU23 88 aaPredicted RBP10.62□□□□□ -0.71
CMTM3-215ENST00000568477 U3KQE9 123 aa10.62□□□□□ -0.71
CMTM3-215ENST00000568477 LINC00862A6NCI5 91 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 HELTA6NFD8 242 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 K7EQG2 157 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 SYNGR2O43760 224 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 TOMM40O96008 361 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 IL4P05112 153 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 RD3LP0DJH9 198 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 PAX9P55771 341 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 BAXQ07812 192 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 USF2Q15853 346 aaPredicted RBP10.61□□□□□ -0.71
CMTM3-215ENST00000568477 BAP18Q8IXM2 172 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 SLC7A5P1Q8MH63 180 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 SLC35E1Q96K37 410 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 SMIM8Q96KF7 97 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 FBXL17Q9UF56 701 aa10.61□□□□□ -0.71
CMTM3-215ENST00000568477 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
CMTM3-215ENST00000568477 ZNF688P0C7X2 276 aa10.6□□□□□ -0.71
CMTM3-215ENST00000568477 ATF4P18848 351 aaPredicted RBP10.6□□□□□ -0.71
CMTM3-215ENST00000568477 GPX4P36969 197 aaPredicted RBP10.6□□□□□ -0.71
CMTM3-215ENST00000568477 EWSR1Q01844 656 aaKnown RBP eCLIP10.6□□□□□ -0.71
CMTM3-215ENST00000568477 EIF5AL1Q6IS14 154 aaKnown RBP10.6□□□□□ -0.71
CMTM3-215ENST00000568477 C16orf54Q6UWD8 224 aa10.6□□□□□ -0.71
CMTM3-215ENST00000568477 ALKAL2Q6UX46 152 aa10.6□□□□□ -0.71
CMTM3-215ENST00000568477 STHQ8IWL8 128 aa10.6□□□□□ -0.71
CMTM3-215ENST00000568477 TMEM252Q8N6L7 170 aa10.6□□□□□ -0.71
CMTM3-215ENST00000568477 GLMPQ8WWB7 406 aa10.6□□□□□ -0.71
CMTM3-215ENST00000568477 SLC25A32Q9H2D1 315 aa10.6□□□□□ -0.71
CMTM3-215ENST00000568477 BORCS7-ASMTA0A0B4J1R7 106 aa10.59□□□□□ -0.71
CMTM3-215ENST00000568477 IGSF23A1L1A6 192 aa10.59□□□□□ -0.71
CMTM3-215ENST00000568477 FAM24AA6NFZ4 105 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms