RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 TRAV5A0A0B4J249 113 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 NPIPB5A8MRT5 1133 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 NBR2O15453 112 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 GNG7O60262 68 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 NUPR1O60356 82 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 SPINK4O60575 86 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 MOSP00540 346 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 HLA-DRB1P01911 266 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 PF4P02776 101 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 RNF224P0DH78 156 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 WT1P19544 449 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-250ENST00000568290 CTRLP40313 264 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 SRSF2Q01130 221 aaKnown RBP6.11□□□□□ -1.43
ATXN3-250ENST00000568290 KIAA1644Q3SXP7 199 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 MINOS1Q5TGZ0 78 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 Q86TA4 180 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 GATD1Q8NB37 220 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 OR10AG1Q8NH19 301 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 SHANK2-AS3Q9BTD1 123 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 RAXQ9Y2V3 346 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 MINOS1-NBL1R4GNA1 71 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 PCNX2A6NKB5 2137 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 TANC2Q9HCD6 1990 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 TRBV19A0A075B6N1 114 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 LOC102724200A0A096LPH7 203 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-250ENST00000568290 SHISA9B4DS77 424 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 NDUFB8O95169 186 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 PPBPP02775 128 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 IGLC1P0CG04 106 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 PSG1P11464 419 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 MYOD1P15172 320 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 SLC35B1P78383 322 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 HOXA4Q00056 320 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-250ENST00000568290 SLAQ13239 276 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 BATFQ16520 125 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 SPRNQ5BIV9 151 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 HCP5Q6MZN7 132 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 SLC25A34Q6PIV7 304 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 DUX4L9Q6RFH8 374 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-250ENST00000568290 SMIM15Q7Z3B0 74 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 MUC15Q8N387 334 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 NPBQ8NG41 125 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 OR11H6Q8NGC7 330 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 ATP6V0BQ99437 205 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 SSBP3Q9BWW4 388 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-250ENST00000568290 WNT10AQ9GZT5 417 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 C7orf69Q9H7B7 122 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 AP5S1Q9NUS5 200 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 RPH3ALQ9UNE2 315 aa6.1□□□□□ -1.43
ATXN3-250ENST00000568290 UNC80Q8N2C7 3258 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 TRAV34A0A0B4J273 112 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 OR4C46A6NHA9 309 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 E7EQL1 145 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 H3BRN7 92 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 SYS1-DBNDD2H3BUS1 97 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 I3L2K1 104 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 NDUFA3O95167 84 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 THBDP07204 575 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 TSPOP30536 169 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 FCGR2BP31994 310 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-250ENST00000568290 CDKN1AP38936 164 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 LINC00310P59036 64 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 SRSF6Q13247 344 aaKnown RBP6.09□□□□□ -1.43
ATXN3-250ENST00000568290 PSG3Q16557 428 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 MLANAQ16655 118 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 UNQ6494/PRO21346Q6UXR6 183 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 SPATA12Q7Z6I5 190 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 OR1N2Q8NGR9 330 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 PRSS3P2Q8NHM4 247 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 FAM122AQ96E09 287 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 RNF125Q96EQ8 232 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 PGLYRP4Q96LB8 373 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 PSMG3-AS1Q96PY0 264 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 TMEM208Q9BTX3 173 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 LPAR2Q9HBW0 351 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 PSG8Q9UQ74 426 aa6.09□□□□□ -1.43
ATXN3-250ENST00000568290 DYSFO75923 2080 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 TMEM189A5PLL7 270 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 CGB1A6NKQ9 187 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 TEX22C9J3V5 150 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 F2Z2F3 143 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 PRTN3P24158 256 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 NBL1P41271 181 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 ZNF672Q499Z4 452 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-250ENST00000568290 Q56UQ5 140 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 LYPD2Q6UXB3 125 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 ZNF562Q6V9R5 426 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 ZNF493Q6ZR52 646 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 GOLT1AQ6ZVE7 132 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 COX8CQ7Z4L0 72 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 PRNTQ86SH4 94 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 RPRMLQ8N4K4 120 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 LY6G5BQ8NDX9 201 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 RCHY1Q96PM5 261 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 HIF1ANQ9NWT6 349 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 ONECUT1Q9UBC0 465 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 CTSZQ9UBR2 303 aa6.08□□□□□ -1.44
ATXN3-250ENST00000568290 INTS1Q8N201 2190 aaKnown RBP6.08□□□□□ -1.44
ATXN3-250ENST00000568290 GTF3C1Q12789 2109 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms