RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 C11orf52Q96A22 123 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 FAM167A-AS1Q96KT0 104 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 SDF2L1Q9HCN8 221 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 DOK5Q9P104 306 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 ZNF580Q9UK33 172 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 HIGD1AQ9Y241 93 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 NBEAL2Q6ZNJ1 2754 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 H3BUX3 64 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 FSHBP01225 129 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 PSG1P11464 419 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 UBE2G2P60604 165 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 UBE2L3P68036 154 aaKnown RBP11.44□□□□□ -0.58
COMMD4-221ENST00000567935 LINC00305Q7Z4B0 112 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 C15orf54Q8N8G6 183 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.44□□□□□ -0.58
COMMD4-221ENST00000567935 NECAP1Q8NC96 275 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 OR5T1Q8NG75 326 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 OR5AU1Q8NGC0 362 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 OR1B1Q8NGR6 318 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 OR5R1Q8NH85 324 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
COMMD4-221ENST00000567935 PAXXQ9BUH6 204 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 SLC25A2Q9BXI2 301 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 PARLQ9H300 379 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 FBXL7Q9UJT9 491 aa11.44□□□□□ -0.58
COMMD4-221ENST00000567935 TRBV9A0A0B4J1U6 114 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 IGHV3-21A0A0B4J1V1 117 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 CXorf65A6NEN9 183 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 H3BUA1 57 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 OR2C1O95371 312 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 AVPP01185 164 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 IGF1P05019 195 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 ORM2P19652 201 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 ATP5G3P48201 142 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 ECSCRQ19T08 205 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 TIGITQ495A1 244 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 Q8WTZ3 238 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 ZNF503Q96F45 646 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 CTDSP1Q9GZU7 261 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 OR51M1Q9H341 326 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 TMEM242Q9NWH2 141 aa11.43□□□□□ -0.58
COMMD4-221ENST00000567935 OR2J3O76001 311 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 NDUFB8O95169 186 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 IGHG2P01859 326 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 AMY1AP04745 511 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 HNF1AP20823 631 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 Q56UQ5 140 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 C19orf54Q5BKX5 351 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 TMEM88Q6PEY1 159 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 TMEM219Q86XT9 240 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 CBLN2Q8IUK8 224 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 C20orf24Q9BUV8 137 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 MRPL27Q9P0M9 148 aaKnown RBP11.42□□□□□ -0.58
COMMD4-221ENST00000567935 TMEM14CQ9P0S9 112 aa11.42□□□□□ -0.58
COMMD4-221ENST00000567935 YTHDF2Q9Y5A9 579 aaKnown RBP11.42□□□□□ -0.58
COMMD4-221ENST00000567935 TRAV41A0A0B4J266 112 aa11.41□□□□□ -0.58
COMMD4-221ENST00000567935 FAM223BA6NKX1 122 aa11.41□□□□□ -0.58
COMMD4-221ENST00000567935 LYZP61626 148 aa11.41□□□□□ -0.58
COMMD4-221ENST00000567935 ZNF674Q2M3X9 581 aa11.41□□□□□ -0.58
COMMD4-221ENST00000567935 FAM223AQ8IWN6 122 aa11.41□□□□□ -0.58
COMMD4-221ENST00000567935 LY96Q9Y6Y9 160 aa11.41□□□□□ -0.58
COMMD4-221ENST00000567935 TRBV7-1A0A0A6YYK4 115 aa11.4□□□□□ -0.58
COMMD4-221ENST00000567935 WI2-2373I1.2A0A1W2PRP0 233 aa11.4□□□□□ -0.58
COMMD4-221ENST00000567935 TSPAN4O14817 238 aa11.4□□□□□ -0.58
COMMD4-221ENST00000567935 NUPL2O15504 423 aaKnown RBP11.4□□□□□ -0.58
COMMD4-221ENST00000567935 MT-ND4LP03901 98 aa11.4□□□□□ -0.58
COMMD4-221ENST00000567935 RHOGP84095 191 aa11.4□□□□□ -0.58
COMMD4-221ENST00000567935 ZNF502Q8TBZ5 544 aa11.4□□□□□ -0.58
COMMD4-221ENST00000567935 EEF1AKMT3Q96AZ1 226 aa11.4□□□□□ -0.58
COMMD4-221ENST00000567935 RNF125Q96EQ8 232 aa11.4□□□□□ -0.58
COMMD4-221ENST00000567935 C9JCJ5 164 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 F8W735 103 aaPredicted RBP11.39□□□□□ -0.59
COMMD4-221ENST00000567935 AP4M1O00189 453 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 NDUFB4O95168 129 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 NPPCP23582 126 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 C15orf32Q32M92 178 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 MORN5Q5VZ52 161 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 ZNF491Q8N8L2 437 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 FXYD5Q96DB9 178 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 SHANK2-AS3Q9BTD1 123 aa11.39□□□□□ -0.59
COMMD4-221ENST00000567935 SLC25A39Q9BZJ4 359 aaPredicted RBP11.39□□□□□ -0.59
COMMD4-221ENST00000567935 TMA7Q9Y2S6 64 aaKnown RBP11.39□□□□□ -0.59
COMMD4-221ENST00000567935 TRAV5A0A0B4J249 113 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 SCO2A0A1W2PP80 73 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 H3BRN7 92 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 OR10J4P0C629 311 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 GP9P14770 177 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 RPL23P62829 140 aaKnown RBP11.38□□□□□ -0.59
COMMD4-221ENST00000567935 KIAA0141Q14154 515 aaPredicted RBP11.38□□□□□ -0.59
COMMD4-221ENST00000567935 ADIRFQ15847 76 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 LY6EQ16553 131 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 DEFB112Q30KQ8 113 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 ZNF600Q6ZNG1 722 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 ANAPC16Q96DE5 110 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 PRDM13Q9H4Q3 707 aa11.38□□□□□ -0.59
COMMD4-221ENST00000567935 TMEM89A2RUT3 159 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 G3V318 75 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 CLDN34H7C241 214 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 PPP1R2P9O14990 202 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms