RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 VPS13DQ5THJ4 4388 aa13.66□□□□□ -0.22
GTF3C1-207ENST00000567806 GOSR2O14653 212 aa13.65□□□□□ -0.22
GTF3C1-207ENST00000567806 TAS2R30P59541 319 aa13.65□□□□□ -0.22
GTF3C1-207ENST00000567806 OR4D5Q8NGN0 318 aa13.65□□□□□ -0.22
GTF3C1-207ENST00000567806 OR1S2Q8NGQ3 325 aa13.65□□□□□ -0.22
GTF3C1-207ENST00000567806 DCANP1Q8TF63 244 aa13.65□□□□□ -0.22
GTF3C1-207ENST00000567806 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
GTF3C1-207ENST00000567806 MGAT4CQ9UBM8 478 aa13.65□□□□□ -0.22
GTF3C1-207ENST00000567806 TRAV10A0A0B4J240 114 aa13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 HNRNPCP07910 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 SLC25A4P12235 298 aa13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 RRAS2P62070 204 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 RAB11AP62491 216 aa13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 ETFRF1Q6IPR1 90 aa13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 CLEC5AQ9NY25 188 aa13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 U3KQE9 123 aa13.64□□□□□ -0.23
GTF3C1-207ENST00000567806 L7N2F9 121 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 IFNA10P01566 189 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 C4BPBP20851 252 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 OR10J1P30954 320 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 RND2P52198 227 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 YPEL3P61236 119 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 VAMP2P63027 116 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 FGL1Q08830 312 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 C2orf83Q53S99 150 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 PSMG4Q5JS54 123 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 PRSS54Q6PEW0 395 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 C16orf54Q6UWD8 224 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 RNASEH2CQ8TDP1 164 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 RBKSQ9H477 322 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 X6R8D5 127 aa13.63□□□□□ -0.23
GTF3C1-207ENST00000567806 SCGB1D2O95969 90 aa13.62□□□□□ -0.23
GTF3C1-207ENST00000567806 IGLC1P0CG04 106 aa13.62□□□□□ -0.23
GTF3C1-207ENST00000567806 NUTF2P61970 127 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-207ENST00000567806 SNRPD3P62318 126 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-207ENST00000567806 Q6ZTC4 211 aa13.62□□□□□ -0.23
GTF3C1-207ENST00000567806 ELOA3CA0A087WX78 387 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 CCSO14618 274 aa13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 TSC22D2O75157 780 aa13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 NPY1RP25929 384 aa13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 CSNK1G2-AS1Q8NCQ2 148 aa13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 GLMPQ8WWB7 406 aa13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 SMIM8Q96KF7 97 aa13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 STRAPQ9Y3F4 350 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-207ENST00000567806 AGRNO00468 2067 aa13.6□□□□□ -0.23
GTF3C1-207ENST00000567806 IGHV4-4A0A075B6R2 117 aa13.6□□□□□ -0.23
GTF3C1-207ENST00000567806 IL4P05112 153 aa13.6□□□□□ -0.23
GTF3C1-207ENST00000567806 NPIPB3Q92617 1050 aa13.6□□□□□ -0.23
GTF3C1-207ENST00000567806 MBPP02686 304 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 GIPP09681 153 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 RD3LP0DJH9 198 aa13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 RAP2BP61225 183 aa13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 POLR2GP62487 172 aaKnown RBP eCLIP13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 IL15RAQ13261 267 aa13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 Q6ZNX1 250 aa13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 RNF126Q9BV68 326 aa13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 SEPSECSQ9HD40 501 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 PSENENQ9NZ42 101 aa13.59□□□□□ -0.23
GTF3C1-207ENST00000567806 HERC2O95714 4834 aa13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 DEFB131BA0A096LNP1 70 aa13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 E5RGE8 158 aa13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 SSSCA1O60232 199 aa13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 S100A10P60903 97 aa13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 USF2Q15853 346 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 ACY3Q96HD9 319 aa13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 NRN1Q9NPD7 142 aa13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 XCL2Q9UBD3 114 aa13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 LSM5Q9Y4Y9 91 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-207ENST00000567806 K7EPK0 472 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 NXPH3O95157 252 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 TOMM40O96008 361 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 GPX4P36969 197 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 H2BFSP57053 126 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 FCN2Q15485 313 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 C12orf74Q32Q52 190 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 SIGLEC15Q6ZMC9 328 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 PPP1R1CQ8WVI7 109 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 SLC25A31Q9H0C2 315 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 MAGT1Q9H0U3 335 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 PFDN2Q9UHV9 154 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 DNAH6Q9C0G6 4158 aa13.57□□□□□ -0.24
GTF3C1-207ENST00000567806 H3BMM0 161 aa13.56□□□□□ -0.24
GTF3C1-207ENST00000567806 BUB3O43684 328 aa13.56□□□□□ -0.24
GTF3C1-207ENST00000567806 IAPPP10997 89 aa13.56□□□□□ -0.24
GTF3C1-207ENST00000567806 RAB32Q13637 225 aa13.56□□□□□ -0.24
GTF3C1-207ENST00000567806 SPANXN5Q5MJ07 72 aa13.56□□□□□ -0.24
GTF3C1-207ENST00000567806 ZNF767PQ75MW2 155 aa13.56□□□□□ -0.24
GTF3C1-207ENST00000567806 THAP6Q8TBB0 222 aa13.56□□□□□ -0.24
GTF3C1-207ENST00000567806 CELA1Q9UNI1 258 aa13.56□□□□□ -0.24
GTF3C1-207ENST00000567806 HECTD4Q9Y4D8 3996 aa13.55□□□□□ -0.24
GTF3C1-207ENST00000567806 SIX6O95475 246 aa13.55□□□□□ -0.24
GTF3C1-207ENST00000567806 PSG1P11464 419 aa13.55□□□□□ -0.24
GTF3C1-207ENST00000567806 BCAP31P51572 246 aa13.55□□□□□ -0.24
GTF3C1-207ENST00000567806 LINC00336Q6ZUF6 198 aa13.55□□□□□ -0.24
GTF3C1-207ENST00000567806 STX12Q86Y82 276 aa13.55□□□□□ -0.24
GTF3C1-207ENST00000567806 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
GTF3C1-207ENST00000567806 TMEM170AQ8WVE7 144 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms