RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 OR5G3P0C626 314 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 IGLC1P0CG04 106 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 GCHFRP30047 84 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 AKR1C3P42330 323 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 CEBPGP53567 150 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 UBE2G2P60604 165 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 BTN1A1Q13410 526 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 ECSCRQ19T08 205 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 DEFB112Q30KQ8 113 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 KHDC3LQ587J8 217 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 FAM78BQ5VT40 261 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 SPNS3Q6ZMD2 512 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 TTC9CQ8N5M4 171 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 TMEM116Q8NCL8 245 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 SGMS2Q8NHU3 365 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 ZNF48Q96MX3 618 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-210ENST00000567654 UHRF2Q96PU4 802 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 RASL11BQ9BPW5 248 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 PBDC1Q9BVG4 233 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 SLC25A2Q9BXI2 301 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 SLC35B3Q9H1N7 401 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 TNFRSF19Q9NS68 423 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 LINC00527Q9UJ94 153 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 FUT9Q9Y231 359 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 MOB4Q9Y3A3 225 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 YTHDF2Q9Y5A9 579 aaKnown RBP4.46□□□□□ -1.7
SF3B3-210ENST00000567654 MXRA5Q9NR99 2828 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 A0A1W2PPV4 95 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 CYSRT1A8MQ03 144 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 CORTO00230 105 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 IGKV1-17P01599 117 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 IGHV4-59P01825 116 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 SNRPCP09234 159 aaKnown RBP4.45□□□□□ -1.7
SF3B3-210ENST00000567654 NHLRC4P0CG21 123 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-210ENST00000567654 PYYP10082 97 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 RHOBP62745 196 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 KRTAP1-1Q07627 177 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 RAB31Q13636 194 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 FHL3Q13643 280 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 TMEM95Q3KNT9 176 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 AKIRIN2Q53H80 203 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 AWAT1Q58HT5 328 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 TMEM88Q6PEY1 159 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 UNQ5815/PRO19632Q6UWF5 114 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 IL17RELQ6ZVW7 336 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 SLC35E3Q7Z769 313 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 CBLN2Q8IUK8 224 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-210ENST00000567654 OR4X1Q8NH49 305 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 FAM110DQ8TAY7 271 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-210ENST00000567654 TRGV9Q99603 122 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 KCNIP2Q9NS61 270 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 C1RLQ9NZP8 487 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 VAX2Q9UIW0 290 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 FLNAP21333 2647 aaKnown RBP4.45□□□□□ -1.7
SF3B3-210ENST00000567654 NAV2Q8IVL1 2488 aa4.45□□□□□ -1.7
SF3B3-210ENST00000567654 H3BQ15 152 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 J3QLI3 93 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 SPRY2O43597 315 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 COX7A2P2O60397 106 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 CLN5O75503 358 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 CXorf1O96002 111 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 OR10J4P0C629 311 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 PSG1P11464 419 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 PSMB3P49720 205 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 PROK1P58294 105 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 TIRAPP58753 221 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 BLCAPP62952 87 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 MEF2BQ02080 365 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-210ENST00000567654 KLK9Q2XQG4 91 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 C9orf152Q5JTZ5 239 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 SOHLH1Q5JUK2 328 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 LEMD1Q68G75 181 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 ETFRF1Q6IPR1 90 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 PRSS57Q6UWY2 283 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 SVBPQ8N300 66 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 OR5AU1Q8NGC0 362 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 OR51G1Q8NGK1 321 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 OR1B1Q8NGR6 318 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 OR4F5Q8NH21 305 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 SUN5Q8TC36 379 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 NOL4LQ96MY1 436 aaPredicted RBP4.44□□□□□ -1.7
SF3B3-210ENST00000567654 OR4F4Q96R69 305 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 DERL1Q9BUN8 251 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 MRPL32Q9BYC8 188 aaKnown RBP4.44□□□□□ -1.7
SF3B3-210ENST00000567654 SMDT1Q9H4I9 107 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 MANBALQ9NQG1 85 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 ZNF355PQ9NSJ1 428 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 KLK9Q9UKQ9 250 aa4.44□□□□□ -1.7
SF3B3-210ENST00000567654 PUS1Q9Y606 427 aaKnown RBP eCLIP4.44□□□□□ -1.7
SF3B3-210ENST00000567654 TRBV9A0A0B4J1U6 114 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 C7orf77A4D0Y5 90 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 PGPEP1LA6NFU8 196 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 ZNF727A8MUV8 499 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 GGTLC3B5MD39 225 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 C11orf94C9JXX5 98 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 H3BTX0 84 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 OR7C2O60412 319 aa4.43□□□□□ -1.7
SF3B3-210ENST00000567654 SNAPINO95295 136 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms