RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 IGHV4-39P01824 125 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 AREGP15514 252 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 UBE2V1Q13404 147 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 PLGLAQ15195 96 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 MMDQ15546 238 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 C21orf62-AS1Q17RA5 79 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 SRSF12Q8WXF0 261 aaKnown RBP18.53■□□□□ 0.56
LINC00543-201ENST00000567234 FOXH1O75593 365 aa18.52■□□□□ 0.56
LINC00543-201ENST00000567234 HNRNPA3P51991 378 aaKnown RBP18.52■□□□□ 0.56
LINC00543-201ENST00000567234 SSBP2P81877 361 aaPredicted RBP18.52■□□□□ 0.56
LINC00543-201ENST00000567234 RPEL1Q2QD12 228 aa18.52■□□□□ 0.56
LINC00543-201ENST00000567234 TDRG1Q3Y452 100 aa18.52■□□□□ 0.56
LINC00543-201ENST00000567234 SPATA31B1PQ5VZV4 182 aa18.52■□□□□ 0.56
LINC00543-201ENST00000567234 OR1L6Q8NGR2 347 aa18.52■□□□□ 0.56
LINC00543-201ENST00000567234 KCNS1Q96KK3 526 aa18.52■□□□□ 0.56
LINC00543-201ENST00000567234 TBL2Q9Y4P3 447 aaKnown RBP18.52■□□□□ 0.56
LINC00543-201ENST00000567234 F11RQ9Y624 299 aaKnown RBP18.52■□□□□ 0.56
LINC00543-201ENST00000567234 HELZ2Q9BYK8 2649 aaKnown RBP18.52■□□□□ 0.55
LINC00543-201ENST00000567234 WNK2Q9Y3S1 2297 aa18.52■□□□□ 0.55
LINC00543-201ENST00000567234 TCRBV4S1A1TA0A5B7 111 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 PTTG1IPP53801 180 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 SPATA45Q537H7 98 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 ZNF738Q8NE65 137 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 NPIPB3Q92617 1050 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 EAF1Q96JC9 268 aaPredicted RBP18.51■□□□□ 0.55
LINC00543-201ENST00000567234 MRPL32Q9BYC8 188 aaKnown RBP18.51■□□□□ 0.55
LINC00543-201ENST00000567234 TECRQ9NZ01 308 aaKnown RBP18.51■□□□□ 0.55
LINC00543-201ENST00000567234 A0A1B0GUS0 222 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 GRIFINA4D1Z8 144 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 FCN1O00602 326 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 ATP5G3P48201 142 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 TAS2R45P59539 299 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 FBXL7Q9UJT9 491 aa18.51■□□□□ 0.55
LINC00543-201ENST00000567234 DOPEY2Q9Y3R5 2298 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 TOX4O94842 621 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 CBLN1P23435 193 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 MFAP2P55001 183 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 EBI3Q14213 229 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 BATFQ16520 125 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 PQLC2Q6ZP29 291 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 MIR17HGQ75NE6 70 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 UHRF2Q96PU4 802 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 TMEM167BQ9NRX6 74 aa18.5■□□□□ 0.55
LINC00543-201ENST00000567234 IGKV1D-37A0A075B6S9 117 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 PSMB11A5LHX3 300 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 GATA2P23769 480 aaPredicted RBP18.49■□□□□ 0.55
LINC00543-201ENST00000567234 UBE2E1P51965 193 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 UBE2G2P60604 165 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 TMEM116Q8NCL8 245 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 OR5T1Q8NG75 326 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 CCL19Q99731 98 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 TXN2Q99757 166 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 HYPMO75409 117 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 NDUFB8O95169 186 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 COX6B1P14854 86 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 OR1L4Q8NGR5 311 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 OCC1Q8TAD7 63 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 NRN1Q9NPD7 142 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 MRPL27Q9P0M9 148 aaKnown RBP18.49■□□□□ 0.55
LINC00543-201ENST00000567234 COX11Q9Y6N1 276 aa18.49■□□□□ 0.55
LINC00543-201ENST00000567234 TRBV20OR9-2A0A075B6H5 130 aa18.48■□□□□ 0.55
LINC00543-201ENST00000567234 RASL11AQ6T310 242 aa18.48■□□□□ 0.55
LINC00543-201ENST00000567234 TRGV9Q99603 122 aa18.48■□□□□ 0.55
LINC00543-201ENST00000567234 A0A1W2PRD5 423 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 A0A1W2PRF3 423 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 A0A1W2PRM7 423 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 NDUFS8O00217 210 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 CNIH1O95406 144 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 HLA-DQA1P01909 254 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 PPBPP02775 128 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 C5orf64Q2M2E5 130 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 Q8N6K4 173 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 SLC25A33Q9BSK2 321 aa18.47■□□□□ 0.55
LINC00543-201ENST00000567234 C8orf88P0DMB2 117 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 CX3CL1P78423 397 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 HES1Q14469 280 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 Q6ZN92 141 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 STPG4Q8N801 248 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 OSTCQ9NRP0 149 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 MRPL36Q9P0J6 103 aaKnown RBP18.46■□□□□ 0.55
LINC00543-201ENST00000567234 TACC2O95359 2948 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 SNURFLB1AK76 121 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 ZNF324O75467 553 aaPredicted RBP18.46■□□□□ 0.55
LINC00543-201ENST00000567234 DYNAPQ8N1N2 210 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 PIMREGQ9BSJ6 248 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 GNB4Q9HAV0 340 aa18.46■□□□□ 0.55
LINC00543-201ENST00000567234 BPIFB3P59826 476 aa18.45■□□□□ 0.54
LINC00543-201ENST00000567234 KRTDAPP60985 99 aa18.45■□□□□ 0.54
LINC00543-201ENST00000567234 FAM168AQ92567 244 aa18.45■□□□□ 0.54
LINC00543-201ENST00000567234 DERL1Q9BUN8 251 aa18.45■□□□□ 0.54
LINC00543-201ENST00000567234 YTHDF2Q9Y5A9 579 aaKnown RBP18.45■□□□□ 0.54
LINC00543-201ENST00000567234 CCL25O15444 150 aa18.44■□□□□ 0.54
LINC00543-201ENST00000567234 NRGNQ92686 78 aa18.44■□□□□ 0.54
LINC00543-201ENST00000567234 TNFRSF19Q9NS68 423 aa18.44■□□□□ 0.54
LINC00543-201ENST00000567234 FBN2P35556 2912 aa18.44■□□□□ 0.54
LINC00543-201ENST00000567234 COX7A2P2O60397 106 aa18.44■□□□□ 0.54
LINC00543-201ENST00000567234 AMTP48728 403 aa18.44■□□□□ 0.54
LINC00543-201ENST00000567234 FXYD3Q14802 87 aa18.44■□□□□ 0.54
LINC00543-201ENST00000567234 MED13LQ71F56 2210 aa18.44■□□□□ 0.54
LINC00543-201ENST00000567234 IGHV3-48P01763 117 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms