RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 IGKV3-20P01619 116 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 OR4E1P0C645 316 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 C4BPBP20851 252 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 POLR2GP62487 172 aaKnown RBP eCLIP7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 ACOT7LQ6ZUV0 252 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 DCANP1Q8TF63 244 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 SDHCQ99643 169 aaPredicted RBP7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 SLC25A22Q9H936 323 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 NRN1Q9NPD7 142 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 GSKIPQ9P0R6 139 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 DOK5Q9P104 306 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 STRAPQ9Y3F4 350 aaKnown RBP7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 IGKV1D-37A0A075B6S9 117 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 TRAV6A0A075B6T7 132 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 CCSO14618 274 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 LY6G6CO95867 125 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 SLC25A6P12236 298 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 BTCP35070 178 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 GPX4P36969 197 aaPredicted RBP7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 NUP62P37198 522 aaPredicted RBP7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 AP2S1P53680 142 aaPredicted RBP7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 DEFB1P60022 68 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 NANOS2P60321 138 aaKnown RBP7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 RRAS2P62070 204 aaPredicted RBP7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 IAH1Q2TAA2 248 aaPredicted RBP7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 TRPT1Q86TN4 253 aaKnown RBP7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 OR8I2Q8N0Y5 310 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 GATAD1Q8WUU5 269 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 C20orf85Q9H1P6 137 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 PSENENQ9NZ42 101 aa7.4□□□□□ -1.22
GTF3C1-206ENST00000566779 RYR2Q92736 4967 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 DNAH7Q8WXX0 4024 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 SNRPGP15A8MWD9 76 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 LYRM1O43325 122 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 BUB3O43684 328 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 CCNKO75909 580 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 ORM2P19652 201 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 GATA2P23769 480 aaPredicted RBP7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 NKX2-1P43699 371 aaPredicted RBP7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 ATP5IP56385 69 aaPredicted RBP7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 FXYD7P58549 80 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 OR1B1Q8NGR6 318 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 C11orf45Q8TAV5 145 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 RAB40CQ96S21 281 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 TRGV9Q99603 122 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 ARPC5LQ9BPX5 153 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 XCL2Q9UBD3 114 aa7.39□□□□□ -1.23
GTF3C1-206ENST00000566779 IGHV3OR16-12A0A075B7B8 117 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 IGKV1OR2-108A0A075B7D4 117 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 IGHV4-28A0A0C4DH34 117 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 METTL15P1P0C7V9 234 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 SPP1P10451 314 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 FGL1Q08830 312 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 ZNF846Q147U1 533 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 MORN3Q6PF18 240 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 CEMP1Q6PRD7 247 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 BPIFCQ8NFQ6 507 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 OR4B1Q8NGF8 309 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 C7orf50Q9BRJ6 194 aaKnown RBP7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 SEC22CQ9BRL7 303 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 TMEM147Q9BVK8 224 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 WDR12Q9GZL7 423 aaKnown RBP7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 NUDT15Q9NV35 164 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 NDUFA13Q9P0J0 144 aa7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 KLK5Q9Y337 293 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 LSM5Q9Y4Y9 91 aaKnown RBP7.38□□□□□ -1.23
GTF3C1-206ENST00000566779 L7N2F9 121 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 IL5P05113 134 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 ID1P41134 155 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 S100A10P60903 97 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 VAMP2P63027 116 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 THAP8Q8NA92 274 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 ZBTB8BQ8NAP8 495 aaPredicted RBP7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 OR4D5Q8NGN0 318 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 LINC00476Q8WZB0 136 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 SLC25A32Q9H2D1 315 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 MGAT4CQ9UBM8 478 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 RCL1Q9Y2P8 373 aaKnown RBP7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 DYNC2H1Q8NCM8 4307 aaKnown RBP7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 CSMD3Q7Z407 3707 aa7.37□□□□□ -1.23
GTF3C1-206ENST00000566779 C5orf51A6NDU8 294 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 PRSS46E5RG02 174 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 F6UB75 175 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 PLA2G10O15496 165 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 TCRBP04435 133 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 OR5G3P0C626 314 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 GALR1P47211 349 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 BCAP31P51572 246 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 NUTF2P61970 127 aaKnown RBP7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 SRSF3P84103 164 aaKnown RBP7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 SLC38A11Q08AI6 406 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 GDF5OSQ5U4N7 250 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 TMEM182Q6ZP80 229 aaPredicted RBP7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 CYP2G1PQ6ZSU1 146 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 ZNF767PQ75MW2 155 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 RSG1Q9BU20 258 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 SCRT1Q9BWW7 348 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 MFFQ9GZY8 342 aa7.36□□□□□ -1.23
GTF3C1-206ENST00000566779 C11orf68Q9H3H3 251 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms