RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 PRSS46E5RG02 174 aa14.56□□□□□ -0.08
CLN6-207ENST00000566347 SPANXN5Q5MJ07 72 aa14.56□□□□□ -0.08
CLN6-207ENST00000566347 SPATA31B1PQ5VZV4 182 aa14.56□□□□□ -0.08
CLN6-207ENST00000566347 TRIQKQ629K1 86 aa14.56□□□□□ -0.08
CLN6-207ENST00000566347 Q6ZTC4 211 aa14.56□□□□□ -0.08
CLN6-207ENST00000566347 CLUHP3Q96NS8 147 aa14.56□□□□□ -0.08
CLN6-207ENST00000566347 SAV1Q9H4B6 383 aaPredicted RBP14.56□□□□□ -0.08
CLN6-207ENST00000566347 APLNQ9ULZ1 77 aa14.56□□□□□ -0.08
CLN6-207ENST00000566347 ISLRO14498 428 aa14.55□□□□□ -0.08
CLN6-207ENST00000566347 SOCS3O14543 225 aa14.55□□□□□ -0.08
CLN6-207ENST00000566347 S100A7P31151 101 aa14.55□□□□□ -0.08
CLN6-207ENST00000566347 MEOX2P50222 304 aa14.55□□□□□ -0.08
CLN6-207ENST00000566347 STRAPQ9Y3F4 350 aaKnown RBP14.55□□□□□ -0.08
CLN6-207ENST00000566347 C9orf170A2RU37 121 aa14.54□□□□□ -0.08
CLN6-207ENST00000566347 NDUFB6O95139 128 aa14.54□□□□□ -0.08
CLN6-207ENST00000566347 GALR1P47211 349 aa14.54□□□□□ -0.08
CLN6-207ENST00000566347 GDF5OSQ5U4N7 250 aa14.54□□□□□ -0.08
CLN6-207ENST00000566347 BPIFCQ8NFQ6 507 aa14.54□□□□□ -0.08
CLN6-207ENST00000566347 NEU1Q99519 415 aa14.54□□□□□ -0.08
CLN6-207ENST00000566347 VPS13DQ5THJ4 4388 aa14.54□□□□□ -0.08
CLN6-207ENST00000566347 FRAS1Q86XX4 4008 aa14.53□□□□□ -0.08
CLN6-207ENST00000566347 ID3Q02535 119 aa14.53□□□□□ -0.08
CLN6-207ENST00000566347 AKR1C1Q04828 323 aa14.53□□□□□ -0.08
CLN6-207ENST00000566347 ZNF705AQ6ZN79 300 aaPredicted RBP14.53□□□□□ -0.08
CLN6-207ENST00000566347 CELA1Q9UNI1 258 aa14.53□□□□□ -0.08
CLN6-207ENST00000566347 SMIM9A6NGZ8 99 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 H3BP45 60 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 ADAP1O75689 374 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 IFNA21P01568 189 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 IGKV3-20P01619 116 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 BAK1Q16611 211 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 EBLN2Q6P2I7 272 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 ACOT7LQ6ZUV0 252 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 OR4B1Q8NGF8 309 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 GPR82Q96P67 336 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 RNF126Q9BV68 326 aa14.52□□□□□ -0.09
CLN6-207ENST00000566347 IGHV4-4A0A075B6R2 117 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 TMEM189A5PLL7 270 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 ZNF98A6NK75 572 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 CENPXA8MT69 81 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 ZNF705FA8MVS1 300 aaPredicted RBP14.51□□□□□ -0.09
CLN6-207ENST00000566347 ZNF705DP0CH99 300 aaPredicted RBP14.51□□□□□ -0.09
CLN6-207ENST00000566347 ZNF705BP0CI00 300 aaPredicted RBP14.51□□□□□ -0.09
CLN6-207ENST00000566347 ORM2P19652 201 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 PAX9P55771 341 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 DEFB1P60022 68 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 C12orf74Q32Q52 190 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 OR4D5Q8NGN0 318 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 C16orf92Q96LL3 132 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 TMEM147Q9BVK8 224 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 SLC25A32Q9H2D1 315 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 SLC25A22Q9H936 323 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 RPRMQ9NS64 109 aa14.51□□□□□ -0.09
CLN6-207ENST00000566347 OR4E1P0C645 316 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 POLR2GP62487 172 aaKnown RBP eCLIP14.5□□□□□ -0.09
CLN6-207ENST00000566347 PRR20EP86478 221 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 PRR20CP86479 221 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 PRR20DP86480 221 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 PRR20BP86481 221 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 PRR20AP86496 221 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 TMEM144Q7Z5S9 345 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 ZNF709Q8N972 641 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 OR1B1Q8NGR6 318 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 PSENENQ9NZ42 101 aa14.5□□□□□ -0.09
CLN6-207ENST00000566347 DEFB131BA0A096LNP1 70 aa14.49□□□□□ -0.09
CLN6-207ENST00000566347 A0A0J9YX75 114 aa14.49□□□□□ -0.09
CLN6-207ENST00000566347 FXYD7P58549 80 aa14.49□□□□□ -0.09
CLN6-207ENST00000566347 PSG9Q00887 426 aa14.49□□□□□ -0.09
CLN6-207ENST00000566347 FAM78BQ5VT40 261 aa14.49□□□□□ -0.09
CLN6-207ENST00000566347 C7orf50Q9BRJ6 194 aaKnown RBP14.49□□□□□ -0.09
CLN6-207ENST00000566347 RSG1Q9BU20 258 aa14.49□□□□□ -0.09
CLN6-207ENST00000566347 FLVCR2Q9UPI3 526 aa14.49□□□□□ -0.09
CLN6-207ENST00000566347 RFNGQ9Y644 331 aa14.49□□□□□ -0.09
CLN6-207ENST00000566347 DNAH10Q8IVF4 4471 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 SMCO3A2RU48 225 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 SSSCA1O60232 199 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 AMBPP02760 352 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 SPART-AS1P0CW21 52 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 GATA2P23769 480 aaPredicted RBP14.48□□□□□ -0.09
CLN6-207ENST00000566347 CNPY1Q3B7I2 92 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 C4orf46Q504U0 113 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 TMEM182Q6ZP80 229 aaPredicted RBP14.48□□□□□ -0.09
CLN6-207ENST00000566347 ZNF767PQ75MW2 155 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 SMIM8Q96KF7 97 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 SLC35B3Q9H1N7 401 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 GOLT1BQ9Y3E0 138 aa14.48□□□□□ -0.09
CLN6-207ENST00000566347 IGHV3OR16-12A0A075B7B8 117 aa14.47□□□□□ -0.09
CLN6-207ENST00000566347 TEX48A0A1B0GUV7 120 aa14.47□□□□□ -0.09
CLN6-207ENST00000566347 LINC00854A0A1B0GVQ3 168 aa14.47□□□□□ -0.09
CLN6-207ENST00000566347 F6UB75 175 aa14.47□□□□□ -0.09
CLN6-207ENST00000566347 IL5P05113 134 aa14.47□□□□□ -0.09
CLN6-207ENST00000566347 CYP2G1PQ6ZSU1 146 aa14.47□□□□□ -0.09
CLN6-207ENST00000566347 SDHCQ99643 169 aaPredicted RBP14.47□□□□□ -0.09
CLN6-207ENST00000566347 DOK5Q9P104 306 aa14.47□□□□□ -0.09
CLN6-207ENST00000566347 DNAH6Q9C0G6 4158 aa14.47□□□□□ -0.09
CLN6-207ENST00000566347 ANXA7P20073 488 aaKnown RBP14.46□□□□□ -0.09
CLN6-207ENST00000566347 RAP2BP61225 183 aa14.46□□□□□ -0.09
CLN6-207ENST00000566347 SELENOTP62341 195 aa14.46□□□□□ -0.09
CLN6-207ENST00000566347 GSG1LQ6UXU4 331 aa14.46□□□□□ -0.09
CLN6-207ENST00000566347 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms