RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, human

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-205	ENST00000566215	UPK3B	Q9BT76	320 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	SMDT1	Q9H4I9	107 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	SMPX	Q9UHP9	88 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	RCL1	Q9Y2P8	373 aa	Known RBP	4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	C7orf77	A4D0Y5	90 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	PCP4L1	A6NKN8	68 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	PPT1	P50897	306 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	RAB5B	P61020	215 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	RND3	P61587	244 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	HAPLN4	Q86UW8	402 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	CCDC71L	Q8N9Z2	235 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	TMEM56	Q96MV1	263 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	MS4A10	Q96PG2	267 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	TP53RK	Q96S44	253 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	RARRES2	Q99969	163 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	C1QTNF4	Q9BXJ3	329 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	TMEM56-RWDD3	S4R434	201 aa		4.43	□□□□□ -1.7
UBE3A-205	ENST00000566215	SORL1	Q92673	2214 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	IGKV1-6	A0A0C4DH72	117 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215		K7EP13	123 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	EIF3G	O75821	320 aa	Known RBP eCLIP	4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	SCGB1D2	O95969	90 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	FHIT	P49789	147 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	SRPX	P78539	464 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	NHLH2	Q02577	135 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	RHEB	Q15382	184 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	PHLDA2	Q53GA4	152 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215		Q6ZRM9	215 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	SLC35G3	Q8N808	338 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	OR4S2	Q8NH73	311 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	CD300LF	Q8TDQ1	290 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	YPEL4	Q96NS1	127 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	NDUFAF3	Q9BU61	184 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	TMEM222	Q9H0R3	208 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	SH3BGRL3	Q9H299	93 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215		X6R8D5	127 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	IGHV7-4-1	A0A0J9YVY3	117 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	C1orf196	B1AJZ1	125 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215		H3BNG1	76 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	MPPED1	O15442	326 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	PPY	P01298	95 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	S100A8	P05109	93 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	SMIM6	P0DI80	62 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	CAMLG	P49069	296 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	FXYD4	P59646	89 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	SAMD13	Q5VXD3	122 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	ZFP82	Q8N141	532 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	C5orf30	Q96GV9	206 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	GPHA2	Q96T91	129 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	KRTAP4-5	Q9BYR2	181 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	PARP12	Q9H0J9	701 aa	Known RBP	4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	SLC35B3	Q9H1N7	401 aa		4.42	□□□□□ -1.7
UBE3A-205	ENST00000566215	C3orf85	A0A1B0GTC6	90 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	DUXB	A0A1W2PPF3	345 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	SRRM4	A7MD48	611 aa	Known RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	PITX3	O75364	302 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	HRAS	P01112	189 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	NPY1R	P25929	384 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	CEACAM6	P40199	344 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	SNRPE	P62304	92 aa	Known RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	LTC4S	Q16873	150 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	RPS10P5	Q9NQ39	176 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	PRSS47	A8MTI9	375 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	UMAD1	C9J7I0	102 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	AKR1C3	P42330	323 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	RPL27A	P46776	148 aa	Known RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	HERV-K104	P61576	105 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	ZNF266	Q14584	549 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	NMS	Q5H8A3	153 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	OR5T1	Q8NG75	326 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	PBDC1	Q9BVG4	233 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	IGLC7	A0M8Q6	106 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	IGSF23	A1L1A6	192 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	CGB1	A6NKQ9	187 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	HSPB6	O14558	160 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	GIG44	P09565	113 aa	Predicted RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	ZNF705D	P0CH99	300 aa	Predicted RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	ZNF705B	P0CI00	300 aa	Predicted RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	RAB5A	P20339	215 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	UCP1	P25874	307 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	SULT1A1	P50225	295 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	OR2B8P	P59922	312 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	ID3	Q02535	119 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	IGSF11	Q5DX21	431 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	SELENOH	Q8IZQ5	122 aa	Known RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	NEK7	Q8TDX7	302 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	EIF5A2	Q9GZV4	153 aa	Known RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215	LYRM2	Q9NU23	88 aa	Predicted RBP	4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215		U3KQE9	123 aa		4.41	□□□□□ -1.7
UBE3A-205	ENST00000566215		F8W735	103 aa	Predicted RBP	4.4	□□□□□ -1.7
UBE3A-205	ENST00000566215	CHEK1	O14757	476 aa		4.4	□□□□□ -1.7
UBE3A-205	ENST00000566215	SAA1	P0DJI8	122 aa	Predicted RBP	4.4	□□□□□ -1.7
UBE3A-205	ENST00000566215	ATP6V0C	P27449	155 aa		4.4	□□□□□ -1.7
UBE3A-205	ENST00000566215	NKX2-1	P43699	371 aa	Predicted RBP	4.4	□□□□□ -1.7
UBE3A-205	ENST00000566215	CLINT1	Q14677	625 aa		4.4	□□□□□ -1.7
UBE3A-205	ENST00000566215	DEFB135	Q30KP9	77 aa		4.4	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms