RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 AGPAT2O15120 278 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 LINC00869P0C866 280 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 LYL1P12980 280 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 GATA2P23769 480 aaPredicted RBP15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 CMC4P56277 68 aaPredicted RBP15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 RPL11P62913 178 aaKnown RBP15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 RAB31Q13636 194 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 ODF3L2Q3SX64 289 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 PXDC1Q5TGL8 231 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 STPG3Q8N7X2 389 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 TUBA4BQ9H853 241 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 FBXL17Q9UF56 701 aa15.71■□□□□ 0.1
SHCBP1-205ENST00000566016 GIPP09681 153 aaPredicted RBP15.7■□□□□ 0.1
SHCBP1-205ENST00000566016 DEFB125Q8N687 156 aa15.7■□□□□ 0.1
SHCBP1-205ENST00000566016 CHAC2Q8WUX2 184 aa15.7■□□□□ 0.1
SHCBP1-205ENST00000566016 MGST2Q99735 147 aa15.7■□□□□ 0.1
SHCBP1-205ENST00000566016 WFDC10AQ9H1F0 79 aa15.7■□□□□ 0.1
SHCBP1-205ENST00000566016 MBD2Q9UBB5 411 aa15.7■□□□□ 0.1
SHCBP1-205ENST00000566016 IGKV3-7A0A075B6H7 116 aa15.69■□□□□ 0.1
SHCBP1-205ENST00000566016 MPDU1O75352 247 aa15.69■□□□□ 0.1
SHCBP1-205ENST00000566016 NHLRC4P0CG21 123 aaPredicted RBP15.69■□□□□ 0.1
SHCBP1-205ENST00000566016 NHLH2Q02577 135 aa15.69■□□□□ 0.1
SHCBP1-205ENST00000566016 SIGLEC15Q6ZMC9 328 aa15.69■□□□□ 0.1
SHCBP1-205ENST00000566016 GBGT1Q8N5D6 347 aa15.69■□□□□ 0.1
SHCBP1-205ENST00000566016 OR5C1Q8NGR4 320 aa15.69■□□□□ 0.1
SHCBP1-205ENST00000566016 DCANP1Q8TF63 244 aa15.69■□□□□ 0.1
SHCBP1-205ENST00000566016 UBE2L5PA0A1B0GUS4 154 aa15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 DNASE2O00115 360 aaPredicted RBP15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 ORM2P19652 201 aa15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 CAMLGP49069 296 aa15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 FGL1Q08830 312 aa15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 LINC00322Q6ZN03 302 aaPredicted RBP15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 S100A7AQ86SG5 101 aa15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 STXBP6Q8NFX7 210 aa15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 OR1B1Q8NGR6 318 aa15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 SRD5A3Q9H8P0 318 aa15.68■□□□□ 0.1
SHCBP1-205ENST00000566016 TENM3Q9P273 2699 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 K7EQG2 157 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 HYPMO75409 117 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 TFPI2P48307 235 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 RAP2BP61225 183 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 THAP6Q8TBB0 222 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 PPP1R14BQ96C90 147 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 GGTLC1Q9BX51 225 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 NRN1Q9NPD7 142 aa15.67■□□□□ 0.1
SHCBP1-205ENST00000566016 SBSPONQ8IVN8 264 aa15.66■□□□□ 0.1
SHCBP1-205ENST00000566016 SEPSECSQ9HD40 501 aaKnown RBP15.66■□□□□ 0.1
SHCBP1-205ENST00000566016 HIGD1AQ9Y241 93 aa15.66■□□□□ 0.1
SHCBP1-205ENST00000566016 HSPB11Q9Y547 144 aa15.66■□□□□ 0.1
SHCBP1-205ENST00000566016 NBEAL2Q6ZNJ1 2754 aa15.66■□□□□ 0.1
SHCBP1-205ENST00000566016 ZNF98A6NK75 572 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 H3BRN7 92 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 RPL12P30050 165 aaKnown RBP15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 PRR20EP86478 221 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 PRR20CP86479 221 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 PRR20DP86480 221 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 PRR20BP86481 221 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 PRR20AP86496 221 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 OR8I2Q8N0Y5 310 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 GPR82Q96P67 336 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 SHANK2-AS3Q9BTD1 123 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 MAP6D1Q9H9H5 199 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 UBQLN2Q9UHD9 624 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 RNF24Q9Y225 148 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 RPL29P47914 159 aaKnown RBP15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 SLC25A39Q9BZJ4 359 aaPredicted RBP15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 ARL6Q9H0F7 186 aa15.65■□□□□ 0.1
SHCBP1-205ENST00000566016 ELOA3CA0A087WX78 387 aaPredicted RBP15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 RBMY1BA6NDE4 496 aaKnown RBP15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 RBMY1EA6NEQ0 496 aaKnown RBP15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 RBMY1DP0C7P1 496 aaKnown RBP15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 FGF7P21781 194 aa15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 CLINT1Q14677 625 aa15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 OPCMLQ14982 345 aa15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 WFDC3Q8IUB2 231 aa15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 CITED4Q96RK1 184 aa15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 DOK5Q9P104 306 aa15.64■□□□□ 0.09
SHCBP1-205ENST00000566016 OR5G3P0C626 314 aa15.63■□□□□ 0.09
SHCBP1-205ENST00000566016 SAMD13Q5VXD3 122 aa15.63■□□□□ 0.09
SHCBP1-205ENST00000566016 ATP5SQ99766 215 aa15.63■□□□□ 0.09
SHCBP1-205ENST00000566016 NPCDR1Q9BY65 106 aa15.63■□□□□ 0.09
SHCBP1-205ENST00000566016 ARV1Q9H2C2 271 aa15.63■□□□□ 0.09
SHCBP1-205ENST00000566016 GALR1P47211 349 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 HAGHQ16775 308 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 PATE2Q6UY27 113 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 Q6ZRG5 221 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 FAM24BQ8N5W8 94 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 ASCL2Q99929 193 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 TM2D3Q9BRN9 247 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 SCRT1Q9BWW7 348 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 SLC25A32Q9H2D1 315 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 SLC25A22Q9H936 323 aa15.62■□□□□ 0.09
SHCBP1-205ENST00000566016 MEOX2P50222 304 aa15.61■□□□□ 0.09
SHCBP1-205ENST00000566016 MIC13Q5XKP0 118 aa15.61■□□□□ 0.09
SHCBP1-205ENST00000566016 AQP10Q96PS8 301 aa15.61■□□□□ 0.09
SHCBP1-205ENST00000566016 UHRF2Q96PU4 802 aa15.61■□□□□ 0.09
SHCBP1-205ENST00000566016 WDR61Q9GZS3 305 aaKnown RBP15.61■□□□□ 0.09
SHCBP1-205ENST00000566016 KCNIP2Q9NS61 270 aa15.61■□□□□ 0.09
SHCBP1-205ENST00000566016 SLC39A9Q9NUM3 307 aa15.61■□□□□ 0.09
SHCBP1-205ENST00000566016 AGRNO00468 2067 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms