RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SRRM5B3KS81 715 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 C9JCJ5 164 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 RBFOX2O43251 390 aaKnown RBP eCLIP3.24□□□□□ -1.89
LINC00561-201ENST00000565815 IGKV1-39P01597 117 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 IGKV1D-39P04432 117 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 OPRK1P41145 380 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 CDC34P49427 236 aaPredicted RBP3.24□□□□□ -1.89
LINC00561-201ENST00000565815 GPM6AP51674 278 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 CLDN18P56856 261 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 Q0VG73 95 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 TMEM183BQ1AE95 376 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 SPANXN5Q5MJ07 72 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 FGFRL1Q8N441 504 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 OR4F5Q8NH21 305 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 RPUSD4Q96CM3 377 aaKnown RBP3.24□□□□□ -1.89
LINC00561-201ENST00000565815 ALKBH3Q96Q83 286 aaPredicted RBP3.24□□□□□ -1.89
LINC00561-201ENST00000565815 OR4F4Q96R69 305 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 ASCL2Q99929 193 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 NAGKQ9UJ70 344 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 WDFY3Q8IZQ1 3526 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 A0A0G2JRQ6 117 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 SHISA9B4DS77 424 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 C11orf94C9JXX5 98 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 J3QLI3 93 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 ITGB1BP1O14713 200 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 CDIPTO14735 213 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 CXorf1O96002 111 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 TGFAP01135 160 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 OR10J4P0C629 311 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 IAPPP10997 89 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 ERVK11-1P61568 191 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 EIF4EBP1Q13541 118 aaPredicted RBP3.23□□□□□ -1.89
LINC00561-201ENST00000565815 ECSCRQ19T08 205 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 C11orf71Q6IPW1 123 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 TEX43Q6ZNM6 134 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 LINC01551Q86U37 167 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF491Q8N8L2 437 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 DTD1Q8TEA8 209 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 C11orf52Q96A22 123 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 GALMQ96C23 342 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 SDSLQ96GA7 329 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 NPCDR1Q9BY65 106 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 OPN3Q9H1Y3 402 aaPredicted RBP3.23□□□□□ -1.89
LINC00561-201ENST00000565815 NCOR1P1Q9H4R4 102 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF581Q9P0T4 197 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 TRAPPC2LQ9UL33 140 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 CBY1Q9Y3M2 126 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 RBM7Q9Y580 266 aaKnown RBP3.23□□□□□ -1.89
LINC00561-201ENST00000565815 TRAPPC1Q9Y5R8 145 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 CENPEQ02224 2701 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 NSD1Q96L73 2696 aaPredicted RBP3.23□□□□□ -1.89
LINC00561-201ENST00000565815 KIAA1549Q9HCM3 1950 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 C20orf202A1L168 122 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF705GA8MUZ8 300 aaPredicted RBP3.23□□□□□ -1.89
LINC00561-201ENST00000565815 OR9G9P0C7N8 305 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 IL3RAP26951 378 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 FGF8P55075 233 aaPredicted RBP3.23□□□□□ -1.89
LINC00561-201ENST00000565815 RAB31Q13636 194 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 PDZD11Q5EBL8 140 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 TIMM23BQ5SRD1 257 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 FAM162BQ5T6X4 162 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 RASL11AQ6T310 242 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 DRAM1Q8N682 238 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 OR4B1Q8NGF8 309 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 CMTM2Q8TAZ6 248 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 APH1AQ96BI3 265 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 CYYR1Q96J86 154 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 S1PR3Q99500 378 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 MIEN1Q9BRT3 115 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 PRO1933Q9H354 126 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 VSIRQ9H7M9 311 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 FUT9Q9Y231 359 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 ACANP16112 2415 aa3.23□□□□□ -1.89
LINC00561-201ENST00000565815 A0A1W2PPV4 95 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 C5orf49A4QMS7 147 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 B4DSR2 109 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 RD3LP0DJH9 198 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 GZMHP20718 246 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 KITLGP21583 273 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 FABP6P51161 128 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 ERVS71-1P61550 626 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 HTD2P86397 168 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 TGFBR3Q03167 851 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 TBC1D28Q2M2D7 210 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 OR10J3Q5JRS4 329 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 SSX7Q7RTT5 188 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 H2BFWTQ7Z2G1 175 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 YRDCQ86U90 279 aaKnown RBP3.22□□□□□ -1.89
LINC00561-201ENST00000565815 TGIF2LXQ8IUE1 241 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 PNKDQ8N490 385 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 SFRP2Q96HF1 295 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 DUX3Q96PT4 197 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 GNB1LQ9BYB4 327 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 FGF23Q9GZV9 251 aaPredicted RBP3.22□□□□□ -1.89
LINC00561-201ENST00000565815 GNB4Q9HAV0 340 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 HES4Q9HCC6 221 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 TMEM106BQ9NUM4 274 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 IL36BQ9NZH7 164 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 CELSR3Q9NYQ7 3312 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 TRGV10A0A0A0MS01 117 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms